RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SKAP2O75563 359 aaPredicted RBP18.51■□□□□ 0.55
RTN4-204ENST00000357732 INHBAP08476 426 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 LINGO3P0C6S8 592 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 ATP4AP20648 1035 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 ZNF200P98182 395 aaPredicted RBP18.51■□□□□ 0.55
RTN4-204ENST00000357732 SATB1Q01826 763 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 TNFAIP1Q13829 316 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 DUOXA2Q1HG44 320 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 SH2D5Q6ZV89 423 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 CMASQ8NFW8 434 aaPredicted RBP18.51■□□□□ 0.55
RTN4-204ENST00000357732 TMEM143Q96AN5 459 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 KCNK13Q9HB14 408 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 ZNF180Q9UJW8 692 aa18.51■□□□□ 0.55
RTN4-204ENST00000357732 ADCY3O60266 1144 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 BANF1O75531 89 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 TMEM63AO94886 807 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 CCNHP51946 323 aaPredicted RBP18.5■□□□□ 0.55
RTN4-204ENST00000357732 ZBTB16Q05516 673 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 BBS9Q3SYG4 887 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 KHDC1Q4VXA5 237 aaKnown RBP18.5■□□□□ 0.55
RTN4-204ENST00000357732 VPS52Q8N1B4 723 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 TMEM120AQ9BXJ8 343 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 RSAD1Q9HA92 442 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 ARL8BQ9NVJ2 186 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.5■□□□□ 0.552e-17■■□□□ 11.9
RTN4-204ENST00000357732 MKS1Q9NXB0 559 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 KCNK4Q9NYG8 393 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 STX18Q9P2W9 335 aaKnown RBP18.5■□□□□ 0.55
RTN4-204ENST00000357732 ZNF212Q9UDV6 495 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 CFAP69A5D8W1 941 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 CHADO15335 359 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 TOM1L1O75674 476 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 ICAM3P32942 547 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 RFC1P35251 1148 aaPredicted RBP18.5■□□□□ 0.55
RTN4-204ENST00000357732 SLC34A1Q06495 639 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 DPYSL3Q14195 570 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 REPS2Q8NFH8 660 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 RAB3IL1Q8TBN0 382 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 FAM136AQ96C01 138 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 PDGFDQ9GZP0 370 aaPredicted RBP18.5■□□□□ 0.55
RTN4-204ENST00000357732 TEX264Q9Y6I9 313 aa18.5■□□□□ 0.55
RTN4-204ENST00000357732 WDR91A4D1P6 747 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 F8W8V4 182 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 FAM189A1O60320 539 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 MAGEC1O60732 1142 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 CST3P01034 146 aaPredicted RBP18.49■□□□□ 0.55
RTN4-204ENST00000357732 FESP07332 822 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 ESRRAP11474 423 aaPredicted RBP18.49■□□□□ 0.55
RTN4-204ENST00000357732 RAP1GDS1P52306 607 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 EIF3EP60228 445 aaKnown RBP18.49■□□□□ 0.55
RTN4-204ENST00000357732 TBCCQ15814 346 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 LGSNQ5TDP6 509 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 PTPRN2Q92932 1015 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 ACSF2Q96CM8 615 aaPredicted RBP18.49■□□□□ 0.55
RTN4-204ENST00000357732 C7orf26Q96N11 449 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 NMRK1Q9NWW6 199 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 NUMBLQ9Y6R0 609 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 TCRBV9S1A1TA0A576 114 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 H0Y3Z8 333 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 AHCYL1O43865 530 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 GSTA2P09210 222 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 RARBP10826 455 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 SERPINB3P29508 390 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 DYNLT1P63172 113 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 TRPC3Q13507 836 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 TTC39BQ5VTQ0 682 aaPredicted RBP18.49■□□□□ 0.55
RTN4-204ENST00000357732 SLC26A11Q86WA9 606 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 PPFIBP2Q8ND30 876 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 STMN2Q93045 179 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 OXNAD1Q96HP4 312 aaPredicted RBP18.49■□□□□ 0.55
RTN4-204ENST00000357732 MRPL4Q9BYD3 311 aaKnown RBP18.49■□□□□ 0.55
RTN4-204ENST00000357732 ADAMTS5Q9UNA0 930 aa18.49■□□□□ 0.55
RTN4-204ENST00000357732 IGKV6D-21A0A0A0MT36 114 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 PSMG1O95456 288 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 DPEP1P16444 411 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 KCNA3P22001 575 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 MYL6P60660 151 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 GAD2Q05329 585 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 OVGP1Q12889 678 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 NBPF20Q3BBV1 942 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 FAM47CQ5HY64 1035 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 SNX30Q5VWJ9 437 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 SNRNP48Q6IEG0 339 aaKnown RBP18.48■□□□□ 0.55
RTN4-204ENST00000357732 LRRC6Q86X45 466 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 UNC45BQ8IWX7 931 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 ZNF483Q8TF39 744 aaPredicted RBP18.48■□□□□ 0.55
RTN4-204ENST00000357732 IQCGQ9H095 443 aaKnown RBP18.48■□□□□ 0.55
RTN4-204ENST00000357732 ZWILCHQ9H900 591 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 DOCK5Q9H7D0 1870 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 TRDMT1O14717 391 aaKnown RBP18.48■□□□□ 0.55
RTN4-204ENST00000357732 OGTO15294 1046 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 RBP3P10745 1247 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 IL1R2P27930 398 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 CDC25CP30307 473 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 SERPINB4P48594 390 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 KCNJ11Q14654 390 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 RCN1Q15293 331 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 PTPN20Q4JDL3 420 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 CYP4A22Q5TCH4 519 aa18.48■□□□□ 0.55
RTN4-204ENST00000357732 ATG16L1Q676U5 607 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms