RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SNCAIPQ9Y6H5 919 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 KLHL33A6NCF5 533 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 WDR64B1ANS9 1081 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RNF8O76064 485 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 EDN1P05305 212 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SPATA31D3P0C874 917 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RTP1P59025 263 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 BPIFB4P59827 614 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SLC25A3Q00325 362 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 CHI3L2Q15782 390 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 CCDC142Q17RM4 750 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 LPCAT4Q643R3 524 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 C15orf39Q6ZRI6 1047 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SPATA31D4Q6ZUB0 917 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RAPH1Q70E73 1250 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 ENOSF1Q7L5Y1 443 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 ZBTB33Q86T24 672 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 USP37Q86T82 979 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 RFX6Q8HWS3 928 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 C4orf19Q8IY42 314 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SLC35B2Q8TB61 432 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SRPK1Q96SB4 655 aaKnown RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 ZNF341Q9BYN7 854 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 FOXP3Q9BZS1 431 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 ST6GALNAC4Q9H4F1 302 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 EBF3Q9H4W6 596 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 SLC7A8Q9UHI5 535 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 MTO1Q9Y2Z2 717 aaKnown RBP10.6□□□□□ -0.71
PTPRA-203ENST00000356147 UBIAD1Q9Y5Z9 338 aa10.6□□□□□ -0.71
PTPRA-203ENST00000356147 MAGEA13PA6NCF6 341 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 COPEO14579 308 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 RNASEH1O60930 286 aaKnown RBP10.59□□□□□ -0.71
PTPRA-203ENST00000356147 PDE5AO76074 875 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 RTN3O95197 1032 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-203ENST00000356147 PYGLP06737 847 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 CD19P15391 556 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 TNFSF9P41273 254 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 ETV4P43268 484 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 SLC18A1P54219 525 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 LAMB3Q13751 1172 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 STRIP1Q5VSL9 837 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 PHF13Q86YI8 300 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-203ENST00000356147 SCUBE1Q8IWY4 988 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 ARFGAP1Q8N6T3 406 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 TFAP2BQ92481 460 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 EPAS1Q99814 870 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 CYP4F11Q9HBI6 524 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 SLC9A2Q9UBY0 812 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 G3BP2Q9UN86 482 aaKnown RBP10.59□□□□□ -0.71
PTPRA-203ENST00000356147 RAD17O75943 681 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 ITGAVP06756 1048 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 RBP3P10745 1247 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 CAP2P40123 477 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 EIF3EP60228 445 aaKnown RBP10.59□□□□□ -0.71
PTPRA-203ENST00000356147 NCOA4Q13772 614 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 PGM5Q15124 567 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 KLHL38Q2WGJ6 581 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 CDR2LQ86X02 465 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-203ENST00000356147 ZNF677Q86XU0 584 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 ULK2Q8IYT8 1036 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 TTLL6Q8N841 843 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 SMC1BQ8NDV3 1235 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 CCDC110Q8TBZ0 833 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 UBE2OQ9C0C9 1292 aaKnown RBP10.59□□□□□ -0.71
PTPRA-203ENST00000356147 FBXO40Q9UH90 709 aa10.59□□□□□ -0.71
PTPRA-203ENST00000356147 TXNDC9O14530 226 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 TM9SF1O15321 606 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 LYPLA1O75608 230 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 ZMPSTE24O75844 475 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 RANBP1P43487 201 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 HSD17B4P51659 736 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 OSTNP61366 133 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 ZNF200P98182 395 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 MCL1Q07820 350 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 RALGPS1Q5JS13 557 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 C1orf228Q6PIY5 440 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 CEP128Q6ZU80 1094 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 WDTC1Q8N5D0 677 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 NKD2Q969F2 451 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 MTBPQ96DY7 904 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 APOPT1Q96IL0 206 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 WNK4Q96J92 1243 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 SLC17A6Q9P2U8 582 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 SCN9AQ15858 1988 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 A6NJR5 290 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 EXTL3O43909 919 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 OPHN1O60890 802 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 C6orf222P0C671 652 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 RAP1GAPP47736 663 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 MYL6P60660 151 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 C1QBPQ07021 282 aaKnown RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 CDC16Q13042 620 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 CNPY1Q3B7I2 92 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 MROH9Q5TGP6 573 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 ARHGEF16Q5VV41 709 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 C16orf46Q6P387 395 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 FAM43BQ6ZT52 329 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms