RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MIER2Q8N344 545 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 CORO7P57737 925 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 PSMC6P62333 389 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 NFYCQ13952 458 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 ELP3Q9H9T3 547 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 CD248Q9HCU0 757 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 CNGB3Q9NQW8 809 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 KDM5CP41229 1560 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 E9PBE3 544 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 EXOSC10Q01780 885 aaKnown RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 TDRD10Q5VZ19 366 aaKnown RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 C16orf62Q7Z3J2 963 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 USP13Q92995 863 aaPredicted RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 FAM200BP0CF97 657 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 GUCA1AP43080 201 aaPredicted RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 SARSP49591 514 aaKnown RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 PLIN5Q00G26 463 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 MFSD4BQ5TF39 518 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 PLA2G4FQ68DD2 849 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 FAM9CQ8IZT9 166 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 MKNK1Q9BUB5 465 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 MOV10L1Q9BXT6 1211 aaKnown RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 RERGLQ9H628 205 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 COPS7BQ9H9Q2 264 aaPredicted RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 NMRK2Q9NPI5 230 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 MTMR4Q9NYA4 1195 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 VPS26AO75436 327 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 GPC1P35052 558 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 KRT20P35900 424 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 ALDH1A3P47895 512 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 TMEM62Q0P6H9 643 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 STK4Q13043 487 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 ARHGAP15Q53QZ3 475 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 SP8Q8IXZ3 490 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 ANKS1AQ92625 1134 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 UBE2OQ9C0C9 1292 aaKnown RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 KLHL4Q9C0H6 718 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 HAO1Q9UJM8 370 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 IGSF9BQ9UPX0 1349 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 ZDHHC9Q9Y397 364 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 NCF1BA6NI72 391 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 SAC3D1A6NKF1 404 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 NCF1CA8MVU1 366 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 DYNC1LI2O43237 492 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 IFNA14P01570 189 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 NCF1P14598 390 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 ATP6V1B2P21281 511 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 STIP1P31948 543 aaKnown RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 COX10Q12887 443 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 ACAD10Q6JQN1 1059 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 HEATR4Q86WZ0 1026 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 BLOC1S5Q8TDH9 187 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 FAM84BQ96KN1 310 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 CAMKK2Q96RR4 588 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 TEX13BQ9BXU2 312 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 PRRG3Q9BZD7 231 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 MTIF3Q9H2K0 278 aaKnown RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 RNF181Q9P0P0 153 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 DDHD2O94830 711 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 PNPLA4P41247 253 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 CLEC17AQ6ZS10 378 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 CCNJLQ8IV13 435 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 ANKRD7Q92527 254 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 LPAR1Q92633 364 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 FAM205CA6NFA0 338 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 CNOT3O75175 753 aaKnown RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 PMPCBO75439 489 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 UPP2O95045 317 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 CYP2C8P10632 490 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 ADRA2BP18089 450 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 TALDO1P37837 337 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 RFX3P48380 749 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 PEX5P50542 639 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 CDH18Q13634 790 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 DDX39BQ13838 428 aaKnown RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 SLC13A5Q86YT5 568 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 CASKIN2Q8WXE0 1202 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 HPDLQ96IR7 371 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 SPRTNQ9H040 489 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 PRMT7Q9NVM4 692 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 FAM25AB3EWG3 89 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 FAM25CB3EWG5 89 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 FAM25GB3EWG6 89 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 BOLA3Q53S33 107 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 CARD9Q9H257 536 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 VTA1Q9NP79 307 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 HPS5Q9UPZ3 1129 aa15.4■□□□□ 0.06
LMX1B-201ENST00000355497 AAR2Q9Y312 384 aaKnown RBP15.4■□□□□ 0.06
LMX1B-201ENST00000355497 SLC2A3P11169 496 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 OR1G1P47890 313 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 GLB1LQ6UWU2 654 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ACSF2Q96CM8 615 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ZSWIM1Q9BR11 485 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 KLHL20Q9Y2M5 609 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ZNF839A8K0R7 811 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 NPTXRO95502 500 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 OASLQ15646 514 aaKnown RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ZNF544Q6NX49 715 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms