RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SOX10P56693 466 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 NCALDP61601 193 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 FUT11Q495W5 492 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 UGT3A1Q6NUS8 523 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 EVPLLA8MZ36 301 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 SKAP2O75563 359 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-202ENST00000355133 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
SCN8A-202ENST00000355133 GIT2Q14161 759 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 MDM1Q8TC05 714 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 JADE3Q92613 823 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 KCNB2Q92953 911 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 PXMP2Q9NR77 195 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 NEXMIFQ5QGS0 1516 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 NFIBO00712 420 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 FAM107AO95990 144 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 GYS1P13807 737 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 EPHX2P34913 555 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 NBPF12Q5TAG4 269 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-202ENST00000355133 DEPDC1Q5TB30 811 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 SLFN11Q7Z7L1 901 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 PLD3Q8IV08 490 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 ZFP42Q96MM3 310 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 FAM111AQ96PZ2 611 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 YME1L1Q96TA2 773 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 PRPF18Q99633 342 aaKnown RBP13.7□□□□□ -0.22
SCN8A-202ENST00000355133 H2AFYO75367 372 aaKnown RBP13.7□□□□□ -0.22
SCN8A-202ENST00000355133 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-202ENST00000355133 RFX3P48380 749 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 OXCT1P55809 520 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 MROH8Q9H579 483 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 RUVBL2Q9Y230 463 aaKnown RBP13.7□□□□□ -0.22
SCN8A-202ENST00000355133 CDC42BPAQ5VT25 1732 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 CASTOR2A6NHX0 329 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 KDM1AO60341 852 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 SUPT7LO94864 414 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 IMPDH2P12268 514 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 CYP11B1P15538 503 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 SREBF1P36956 1147 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 OVGP1Q12889 678 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 PWP1Q13610 501 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 TRIP10Q15642 601 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 TTLL9Q3SXZ7 439 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 CENPPQ6IPU0 288 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 TRPM8Q7Z2W7 1104 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 CD302Q8IX05 232 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 CGRRF1Q99675 332 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 A0A087WZ62 844 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 A0A087X0T9 212 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 DDTLA6NHG4 134 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 C16orf96A6NNT2 1141 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 FAM228BP0C875 321 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 NEK2P51955 445 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 MRNIPQ6NTE8 343 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 LRRC8BQ6P9F7 803 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 DEFB128Q7Z7B8 93 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 SLC16A10Q8TF71 515 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 VPS50Q96JG6 964 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 FDXACB1Q9BRP7 624 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 SLC12A8A0AV02 714 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 ALDH1A2O94788 518 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 WDR47O94967 919 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 STIP1P31948 543 aaKnown RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 SERPINB10P48595 397 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 PLOD1Q02809 727 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 ERAP2Q6P179 960 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 POTEAQ6S8J7 498 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 EFL1Q7Z2Z2 1120 aaKnown RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 RIBC1Q8N443 379 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 FBXO36Q8NEA4 188 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 APOL2Q9BQE5 337 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 IARS2Q9NSE4 1012 aaKnown RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 RGL2O15211 777 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 APOA1P02647 267 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 THP07101 528 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 DNAJB2P25686 324 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 WEE1P30291 646 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 SEC24CP53992 1094 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 SKOR1P84550 965 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 TP53BP2Q13625 1128 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 ICE2Q659A1 982 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 ARID3BQ8IVW6 561 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 TMCO5AQ8N6Q1 288 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 PACSIN1Q9BY11 444 aa13.69□□□□□ -0.22
SCN8A-202ENST00000355133 ASCC2Q9H1I8 757 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-202ENST00000355133 EGFRP00533 1210 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 LSP1P33241 339 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 CDC16Q13042 620 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 DNAJC3Q13217 504 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 AGAP9Q5VTM2 703 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 MMGT1Q8N4V1 131 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 CASKIN2Q8WXE0 1202 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 OPTNQ96CV9 577 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 OSMRQ99650 979 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 EXOSC4Q9NPD3 245 aaKnown RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 OLFML3Q9NRN5 406 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 VPS9D1Q9Y2B5 631 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 PTPRUQ92729 1446 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 MADDQ8WXG6 1647 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms