RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZC2HC1CQ53FD0 456 aaPredicted RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 CLEC17AQ6ZS10 378 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 C1orf186Q6ZWK4 172 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 RAB44Q7Z6P3 723 aaPredicted RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 ARL14EPQ8N8R7 260 aaPredicted RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 PNPLA1Q8N8W4 532 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 MDM1Q8TC05 714 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 GTF3C6Q969F1 213 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 CAMK1GQ96NX5 476 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 MSTO1Q9BUK6 570 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 TMLHEQ9NVH6 421 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 OGFRQ9NZT2 677 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 PILRBQ9UKJ0 227 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 RAXQ9Y2V3 346 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 KIAA1549LQ6ZVL6 1849 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 FAM221BA6H8Z2 402 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 SGK1O00141 431 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 PIRO00625 290 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 SNPHO15079 494 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 OGTO15294 1046 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 PAX3P23760 479 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 CDC25AP30304 524 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 RPL10AP62906 217 aaKnown RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 MRPS21P82921 87 aaKnown RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 KDSRQ06136 332 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 ORC2Q13416 577 aaPredicted RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 TRIP6Q15654 476 aaKnown RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 ME3Q16798 604 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 KCNK18Q7Z418 384 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 CEP76Q8TAP6 659 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 TIPINQ9BVW5 301 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 TMEM206Q9H813 350 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 CGNQ9P2M7 1197 aaKnown RBP12.03□□□□□ -0.48
RTN3-204ENST00000354497 KCNG1Q9UIX4 513 aa12.03□□□□□ -0.48
RTN3-204ENST00000354497 ITPR1Q14643 2758 aa12.02□□□□□ -0.48
RTN3-204ENST00000354497 ABCA7Q8IZY2 2146 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 NPHP3-ACAD11A0A0J9YXS1 232 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 C2orf78A6NCI8 922 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 MYMKA6NI61 221 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 SCAMP3O14828 347 aaKnown RBP12.02□□□□□ -0.49
RTN3-204ENST00000354497 AP5Z1O43299 807 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 SH3BP5O60239 455 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 CAPNS1P04632 268 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 SERPINF2P08697 491 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 FTH1P19P0C7X4 201 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 CYP2F1P24903 491 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 GUCY2CP25092 1073 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 SLC6A11P48066 632 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 HNRNPDQ14103 355 aaKnown RBP12.02□□□□□ -0.49
RTN3-204ENST00000354497 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 EOGTQ5NDL2 527 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 SFTPA1Q8IWL2 248 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 SCN4BQ8IWT1 228 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 CD302Q8IX05 232 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 FSIP1Q8NA03 581 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 TSPAN18Q96SJ8 248 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 PLIN2Q99541 437 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 NTPCRQ9BSD7 190 aaKnown RBP12.02□□□□□ -0.49
RTN3-204ENST00000354497 MYO16Q9Y6X6 1858 aa12.02□□□□□ -0.49
RTN3-204ENST00000354497 GCN1Q92616 2671 aaKnown RBP12.01□□□□□ -0.49
RTN3-204ENST00000354497 ZNF638Q14966 1978 aaKnown RBP12.01□□□□□ -0.49
RTN3-204ENST00000354497 H0YCG3 227 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 K7ENM7 598 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 EPB41L2O43491 1005 aaKnown RBP12.01□□□□□ -0.49
RTN3-204ENST00000354497 NOL4O94818 638 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 APODP05090 189 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 CD59P13987 128 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 HDCP19113 662 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 ACAT1P24752 427 aaKnown RBP12.01□□□□□ -0.49
RTN3-204ENST00000354497 PDIA5Q14554 519 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 NFE2Q16621 373 aaPredicted RBP12.01□□□□□ -0.49
RTN3-204ENST00000354497 SV2CQ496J9 727 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 EMC10Q5UCC4 262 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 IL17RCQ8NAC3 791 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 PNKPQ96T60 521 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 DPP3Q9NY33 737 aa12.01□□□□□ -0.49
RTN3-204ENST00000354497 DMXL2Q8TDJ6 3036 aa12□□□□□ -0.49
RTN3-204ENST00000354497 ANO9A1A5B4 782 aa12□□□□□ -0.49
RTN3-204ENST00000354497 LEFTY2O00292 366 aa12□□□□□ -0.49
RTN3-204ENST00000354497 ARHGAP33O14559 1287 aa12□□□□□ -0.49
RTN3-204ENST00000354497 KAT7O95251 611 aa12□□□□□ -0.49
RTN3-204ENST00000354497 CYP17A1P05093 508 aa12□□□□□ -0.49
RTN3-204ENST00000354497 SYPP08247 313 aa12□□□□□ -0.49
RTN3-204ENST00000354497 HOXD12P35452 270 aa12□□□□□ -0.49
RTN3-204ENST00000354497 ACOT2P49753 483 aa12□□□□□ -0.49
RTN3-204ENST00000354497 ZNF445P59923 1031 aa12□□□□□ -0.49
RTN3-204ENST00000354497 RESTQ13127 1097 aa12□□□□□ -0.49
RTN3-204ENST00000354497 SPDYCQ5MJ68 293 aa12□□□□□ -0.49
RTN3-204ENST00000354497 PEAR1Q5VY43 1037 aaPredicted RBP12□□□□□ -0.49
RTN3-204ENST00000354497 CCNI2Q6ZMN8 369 aaPredicted RBP12□□□□□ -0.49
RTN3-204ENST00000354497 RABEPKQ7Z6M1 372 aa12□□□□□ -0.49
RTN3-204ENST00000354497 FILIP1Q7Z7B0 1213 aa12□□□□□ -0.49
RTN3-204ENST00000354497 SPATA2LQ8IUW3 424 aaPredicted RBP12□□□□□ -0.49
RTN3-204ENST00000354497 NAXDQ8IW45 347 aa12□□□□□ -0.49
RTN3-204ENST00000354497 RGL4Q8IZJ4 473 aa12□□□□□ -0.49
RTN3-204ENST00000354497 C4orf32Q8N8J7 132 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms