RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 CYP1A1P04798 512 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 APRTP07741 180 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 GHRP10912 638 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 MAGEA4P43358 317 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 OTUD4Q01804 1114 aaKnown RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 TAOK1Q7L7X3 1001 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 MAP7D3Q8IWC1 876 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 FUKQ8N0W3 1084 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 RMDN2Q96LZ7 410 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 TWNKQ96RR1 684 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 DNAI2Q9GZS0 605 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 STMN4Q9H169 189 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 TUBGCP4Q9UGJ1 667 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 NUDT5Q9UKK9 219 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 PRG3Q9Y2Y8 225 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 MKI67P46013 3256 aaKnown RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 A0A1W2PPM1 405 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 MICAL2O94851 1124 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 MYBL1P10243 752 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 CA4P22748 312 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 ERFP50548 548 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 ZBTB16Q05516 673 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 CLUL1Q15846 466 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 PKN2Q16513 984 aaKnown RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 PTPN20Q4JDL3 420 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 MTHFD1LQ6UB35 978 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 NPNTQ6UXI9 565 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 CPXM1Q96SM3 734 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 TRAIPQ9BWF2 469 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 STRIP2Q9ULQ0 834 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 CNTNAP2Q9UHC6 1331 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 COL2A1P02458 1487 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 WDR81Q562E7 1941 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 MYO18AQ92614 2054 aaKnown RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 KCNN4O15554 427 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 B3GAT3O94766 335 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 CPP00450 1065 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 ITIH2P19823 946 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 CDC25CP30307 473 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 ICAM3P32942 547 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 GNL1P36915 607 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 NOL9Q5SY16 702 aaKnown RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 RWDD4Q6NW29 188 aaKnown RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 FAM117BQ6P1L5 589 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 NOTUMQ6P988 496 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 WDTC1Q8N5D0 677 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 NPLOC4Q8TAT6 608 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 ATXN7L3BQ96GX2 97 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 TACO1Q9BSH4 297 aaKnown RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 ASNSD1Q9NWL6 643 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 TXNDC16Q9P2K2 825 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 CYTH4Q9UIA0 394 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 CHMP2BQ9UQN3 213 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 FNDC3AQ9Y2H6 1198 aaKnown RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 NR2E3Q9Y5X4 410 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 LTBP3Q9NS15 1303 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 MAPK13O15264 365 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 ZC3H11AO75152 810 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 IQCF3P0C7M6 154 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 KLF1Q13351 362 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 ANKRD22Q5VYY1 191 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 TRPM8Q7Z2W7 1104 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 RUNDC3BQ96NL0 473 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 GAD1Q99259 594 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 TPX2Q9ULW0 747 aaKnown RBP10.88□□□□□ -0.67
SMPD4-201ENST00000351288 MCM3APO60318 1980 aa10.88□□□□□ -0.67
SMPD4-201ENST00000351288 TCRBV7S3A2A0A539 114 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 CLDN5O00501 218 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 SMIM10L2AP0DMW4 78 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 SMIM10L2BP0DMW5 78 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 ELNP15502 786 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 ATP2A2P16615 1042 aaKnown RBP10.87□□□□□ -0.67
SMPD4-201ENST00000351288 IL1R2P27930 398 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 SLC1A1P43005 524 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 AP3M2P53677 418 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 RHBDF2Q6PJF5 856 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 APPL2Q8NEU8 664 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 MAML3Q96JK9 1138 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-201ENST00000351288 TMEM134Q9H6X4 195 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 WHRNQ9P202 907 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 STRNO43815 780 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 IL18RAPO95256 599 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 FOXN2P32314 431 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 ARHGAP1Q07960 439 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 PTP4A2Q12974 167 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 PTK6Q13882 451 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 MFSD10Q14728 455 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 CCDC142Q17RM4 750 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 RSPH3Q86UC2 560 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 FAM228AQ86W67 206 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 PIWIL1Q96J94 861 aaKnown RBP10.87□□□□□ -0.67
SMPD4-201ENST00000351288 SLITRK1Q96PX8 696 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.87□□□□□ -0.673e-8■□□□□ 9.5
SMPD4-201ENST00000351288 XPOTO43592 962 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms