RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 BEST1O76090 585 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 MICAL2O94851 1124 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 TPM3P06753 285 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 MYL4P12829 197 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 NPR3P17342 541 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 BRD2P25440 801 aaKnown RBP14.75□□□□□ -0.05
SEC13-202ENST00000350697 MAP3K7CLP57077 242 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 SLC8A3P57103 927 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 MTMR3Q13615 1198 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 CNGA2Q16280 664 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 SLC5A9Q2M3M2 681 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 GOLGA7BQ2TAP0 167 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 PRSS36Q5K4E3 855 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 LCLAT1Q6UWP7 414 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 OTOP3Q7RTS5 596 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 ADHFE1Q8IWW8 467 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 STKLD1Q8NE28 680 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 ZMIZ2Q8NF64 920 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 ANP32BQ92688 251 aaKnown RBP14.75□□□□□ -0.05
SEC13-202ENST00000350697 MYRFLQ96LU7 910 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 GPR88Q9GZN0 384 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 ZNF334Q9HCZ1 680 aaPredicted RBP14.75□□□□□ -0.05
SEC13-202ENST00000350697 PNPLA8Q9NP80 782 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 NLRC4Q9NPP4 1024 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.75□□□□□ -0.05
SEC13-202ENST00000350697 IFNKQ9P0W0 207 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 MAGED2Q9UNF1 606 aaPredicted RBP14.75□□□□□ -0.05
SEC13-202ENST00000350697 NR2E1Q9Y466 385 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 NCOR1O75376 2440 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 DOCK8Q8NF50 2099 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 F8VZ95 297 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 CYP26A1O43174 497 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 MED7O43513 233 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 RTN3O95197 1032 aaPredicted RBP14.75□□□□□ -0.05
SEC13-202ENST00000350697 GABRR2P28476 465 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 GNA15P30679 374 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 CCR2P41597 374 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 BCAT1P54687 386 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 BPIFB4P59827 614 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 PTK2Q05397 1052 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 GET4Q7L5D6 327 aaPredicted RBP14.75□□□□□ -0.05
SEC13-202ENST00000350697 TTC30AQ86WT1 665 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 NUP93Q8N1F7 819 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 ITFG1Q8TB96 612 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 ACSF2Q96CM8 615 aaPredicted RBP14.75□□□□□ -0.05
SEC13-202ENST00000350697 RPGRIP1Q96KN7 1286 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 SPAG5Q96R06 1193 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 ZSWIM1Q9BR11 485 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 TTLL2Q9BWV7 592 aa14.75□□□□□ -0.05
SEC13-202ENST00000350697 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.75□□□□□ -0.05
SEC13-202ENST00000350697 TNFRSF10BO14763 440 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 THAP12O43422 761 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 CBFA2T2O43439 604 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 CALCAP01258 141 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 PNMA6AP0CW24 399 aaPredicted RBP14.74□□□□□ -0.05
SEC13-202ENST00000350697 CDC25CP30307 473 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 GBP2P32456 591 aaPredicted RBP14.74□□□□□ -0.05
SEC13-202ENST00000350697 CLCN1P35523 988 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 SLC5A3P53794 718 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 JAM2P57087 298 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 ZP2Q05996 745 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 BST2Q10589 180 aaKnown RBP14.74□□□□□ -0.05
SEC13-202ENST00000350697 MEA1Q16626 185 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 PTPN21Q16825 1174 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 GAREM2Q75VX8 874 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 CACNA2D4Q7Z3S7 1137 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 GAS2L3Q86XJ1 694 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 TDRD5Q8NAT2 981 aaKnown RBP14.74□□□□□ -0.05
SEC13-202ENST00000350697 SHKBP1Q8TBC3 707 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 ZNF606Q8WXB4 792 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 FGF13Q92913 245 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 TCEAL4Q96EI5 215 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 GCNAQ96QF7 691 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 UBXN6Q9BZV1 441 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 XPO4Q9C0E2 1151 aaKnown RBP14.74□□□□□ -0.05
SEC13-202ENST00000350697 RBSNQ9H1K0 784 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 GRPEL1Q9HAV7 217 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 IL21Q9HBE4 155 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 ACP6Q9NPH0 428 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 COMMD8Q9NX08 183 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 CDH7Q9ULB5 785 aa14.74□□□□□ -0.05
SEC13-202ENST00000350697 ZFP37Q9Y6Q3 630 aaPredicted RBP14.74□□□□□ -0.05
SEC13-202ENST00000350697 ZNF638Q14966 1978 aaKnown RBP14.74□□□□□ -0.05
SEC13-202ENST00000350697 PATJQ8NI35 1801 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 A0A1W2PRU2 124 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 HHLA1C9JL84 531 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 M0QYV0 167 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 XPO1O14980 1071 aaKnown RBP14.73□□□□□ -0.05
SEC13-202ENST00000350697 MOSPD3O75425 235 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 F11P03951 625 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 SETSIPP0DME0 302 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 CEBPBP17676 345 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 SP100P23497 879 aaPredicted RBP14.73□□□□□ -0.05
SEC13-202ENST00000350697 SOX5P35711 763 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 PBX1P40424 430 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 STAT1P42224 750 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 USP46P62068 366 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 PDE4CQ08493 712 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 PKDCCQ504Y2 493 aa14.73□□□□□ -0.05
SEC13-202ENST00000350697 NPAS3Q8IXF0 933 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms