RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 KAT6AQ92794 2004 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 MEIS3P2A8K0S8 358 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 A8MXQ7 604 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PI4K2BG5E9Z4 385 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TULP2O00295 520 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 INPPL1O15357 1258 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PAPSS1O43252 624 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 HCRTO43612 131 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 LIASO43766 372 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 CAND2O75155 1236 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TJP3O95049 919 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TRUB2O95900 331 aaKnown RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 GAS8O95995 478 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 NUDT17P0C025 328 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 KRT10P13645 584 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 ELNP15502 786 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 ITIH2P19823 946 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 GPD1P21695 349 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 KDELR1P24390 212 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 LMO2P25791 158 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 KLRC2P26717 231 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 HOXD10P28358 340 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 MIPP30301 263 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 GNL1P36915 607 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 SSR1P43307 286 aaKnown RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 RAB27AP51159 221 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 BCAT1P54687 386 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 GYS2P54840 703 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PLTPP55058 493 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 SNX16P57768 344 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 SLC6A3Q01959 620 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 KRT17Q04695 432 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 DHX9Q08211 1270 aaKnown RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PDE4CQ08493 712 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 ZNF844Q08AG5 666 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 BST2Q10589 180 aaKnown RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 SNX1Q13596 522 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 LLGL1Q15334 1064 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 OASLQ15646 514 aaKnown RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PTGISQ16647 500 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 KCTD19Q17RG1 926 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 DEFB115Q30KQ5 88 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TTMPQ5BVD1 217 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TFDP3Q5H9I0 405 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 ZNF618Q5T7W0 954 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 FAM102AQ5T9C2 384 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 OR6B2Q6IFH4 312 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TRAF7Q6Q0C0 670 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 AGMOQ6ZNB7 445 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 BBS12Q6ZW61 710 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 SLC26A9Q7LBE3 791 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 VSIG1Q86XK7 387 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 CCDC50Q8IVM0 306 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 HACE1Q8IYU2 909 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 ADGRF2Q8IZF7 708 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 SLC43A3Q8NBI5 491 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 APPL2Q8NEU8 664 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PXYLP1Q8TE99 480 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 RXFP2Q8WXD0 754 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PIWIL1Q96J94 861 aaKnown RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 HSFY1Q96LI6 401 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PEBP4Q96S96 227 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 GAD1Q99259 594 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 HNRNPABQ99729 332 aaKnown RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 NCAPGQ9BPX3 1015 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 C11orf84Q9BUA3 381 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 FRMD8P1Q9BZ68 369 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TSPYL2Q9H2G4 693 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-203ENST00000350034 SNX25Q9H3E2 840 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 SYNCQ9H7C4 482 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 GOLGA2P5Q9HBQ8 144 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TMBIM4Q9HC24 238 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 FAM49BQ9NUQ9 324 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 KLHL11Q9NVR0 708 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 ASNSD1Q9NWL6 643 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 MIOSQ9NXC5 875 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 VPS18Q9P253 973 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 HESX1Q9UBX0 185 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 RAPGEFL1Q9UHV5 662 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 PLAAQ9Y263 795 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 TRIOBPQ9H2D6 2365 aa7.27□□□□□ -1.25
TRIM55-203ENST00000350034 MKI67P46013 3256 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CASP8AP2Q9UKL3 1982 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 A0A0U1RQF3 1178 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 LRRD1A4D1F6 860 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 ZNF487B1APH4 448 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CYB561D2O14569 222 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 MGEA5O60502 916 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 HUS1O60921 280 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 GNRH1P01148 92 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PDGFRBP09619 1106 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CTSHP09668 335 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 RARGP13631 454 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PDGFRAP16234 1089 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PAX3P23760 479 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 IGFBP6P24592 240 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 TKTP29401 623 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 RPL9P32969 192 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 GJC1P36383 396 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 MLH1P40692 756 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms