RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SLC16A2P36021 539 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 ADCY8P40145 1251 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 NKX2-5P52952 324 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 AP3M2P53677 418 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 ALDH18A1P54886 795 aaKnown RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 ARHGAP8P85298 464 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 TRIM28Q13263 835 aaKnown RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 RGS21Q2M5E4 152 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 FAM117BQ6P1L5 589 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 KYAT3Q6YP21 454 aaKnown RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 NEK10Q6ZWH5 1172 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 SV2BQ7L1I2 683 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 SLC13A5Q86YT5 568 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 CADM3Q8N126 398 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 CNGB3Q9NQW8 809 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 HACD3Q9P035 362 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 TAGLN3Q9UI15 199 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 PCDHB2Q9Y5E7 798 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 PAPPAQ13219 1627 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 DDHD2O94830 711 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ZNF23P17027 643 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 HSPA6P17066 643 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 RRM1P23921 792 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 NDST2P52849 883 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CDH15P55291 814 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 UBAP2LQ14157 1087 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 PCSK7Q16549 785 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 NDUFA5Q16718 116 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 OGFRL1Q5TC84 451 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 UTS2BQ765I0 119 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 BLIDQ8IZY5 108 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ESX1Q8N693 406 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 UBL4BQ8N7F7 174 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 GABPB2Q8TAK5 448 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 OLIG1Q8TAK6 271 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 SUN5Q8TC36 379 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 TCP10LQ8TDR4 215 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CAPSLQ8WWF8 208 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 C12orf43Q96C57 262 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 WNK4Q96J92 1243 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ZSWIM1Q9BR11 485 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 SHCBP1LQ9BZQ2 653 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CYP4F11Q9HBI6 524 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CDC14AQ9UNH5 594 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 SCINQ9Y6U3 715 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CCDC194A0A1B0GVG4 234 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 MINDY4BA8MYZ0 360 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ERVV-1B6SEH8 477 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CLDN3O15551 220 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 SPOPO43791 374 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ATE1O95260 518 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 PDE8BO95263 885 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 TMEM253P0C7T8 217 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CCDC130P13994 396 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 IREB2P48200 963 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 BMXP51813 675 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 RPL26P61254 145 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 MRPS9P82933 396 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 IFITM2Q01629 132 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 BNIP3Q12983 259 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 DLGAP5Q15398 846 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 TBC1D15Q8TC07 691 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 EFHD2Q96C19 240 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ISOC1Q96CN7 298 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ZNF512BQ96KM6 892 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 FAM118BQ9BPY3 351 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CHST7Q9NS84 486 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 KIAA1257Q9ULG3 409 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 MYH3P11055 1940 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 NCANO14594 1321 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 POTECB2RU33 542 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 KLHL41O60662 606 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 BGNP21810 368 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ADSLP30566 484 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CPOXP36551 454 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CLK3P49761 638 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CTSWP56202 376 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ARHGAP4P98171 946 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 MESDQ14696 234 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ALX1Q15699 326 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CYP1B1Q16678 543 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 TRIM16LQ309B1 348 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 IFIT1BQ5T764 474 aaKnown RBP11.1□□□□□ -0.63
CAPN3-203ENST00000349748 CCDC81Q6ZN84 652 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 ITIH5Q86UX2 942 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 LCORLQ8N3X6 602 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 LILRB4Q8NHJ6 448 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 EXD1Q8NHP7 514 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 DCLK3Q9C098 648 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 MAGEF1Q9HAY2 307 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 BLOC1S4Q9NUP1 217 aa11.1□□□□□ -0.63
CAPN3-203ENST00000349748 MYH11P35749 1972 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 PIK3CDO00329 1044 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms