RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 NR3C1P04150 777 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 USP17L7P0C7H9 530 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 BDNFP23560 247 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 GRIK1P39086 918 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 CASP4P49662 377 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 PDE6CP51160 858 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 NRLP54845 237 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 FAM160A1Q05DH4 1040 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 TNK2Q07912 1038 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 MDH1BQ5I0G3 518 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 TDRD10Q5VZ19 366 aaKnown RBP12.69□□□□□ -0.38
TUBD1-203ENST00000346141 CC2D1AQ6P1N0 951 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-203ENST00000346141 TXNDC11Q6PKC3 985 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 DENND5BQ6ZUT9 1274 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 SPEM1Q8N4L4 309 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 PLEKHO2Q8TD55 490 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 GKN1Q9NS71 199 aa12.69□□□□□ -0.38
TUBD1-203ENST00000346141 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
TUBD1-203ENST00000346141 A8MXQ7 604 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 CALUO43852 315 aaPredicted RBP12.68□□□□□ -0.38
TUBD1-203ENST00000346141 RHOBTB3O94955 611 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 CLSTN1O94985 981 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 CKMP06732 381 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 PFKLP17858 780 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 PTPN1P18031 435 aaKnown RBP12.68□□□□□ -0.38
TUBD1-203ENST00000346141 CXCL12P48061 93 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 AMPD2Q01433 879 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 NCOA4Q13772 614 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 PDGFRLQ15198 375 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 ZNF699Q32M78 642 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 SYNPOQ8N3V7 929 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 SUMF1Q8NBK3 374 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 TTC8Q8TAM2 541 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 RUBCNQ92622 972 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 CCDC34Q96HJ3 373 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 C8orf48Q96LL4 319 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 ELOVL4Q9GZR5 314 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 TRPC7Q9HCX4 862 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 TRAF3IP3Q9Y228 551 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 FRMD4BQ9Y2L6 1034 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
TUBD1-203ENST00000346141 MAPK13O15264 365 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 LILRB5O75023 590 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 C4BPAP04003 597 aaKnown RBP12.67□□□□□ -0.38
TUBD1-203ENST00000346141 TDGF1P13385 188 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 P4HA1P13674 534 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 PPP3CCP48454 512 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 NOP14P78316 857 aaKnown RBP12.67□□□□□ -0.38
TUBD1-203ENST00000346141 DPYDQ12882 1025 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 RUNX3Q13761 415 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 CCINQ13939 588 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 KCNB1Q14721 858 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 PON2Q15165 354 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 ZNF667Q5HYK9 610 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 KRBA2Q6ZNG9 492 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 B3GALNT2Q8NCR0 500 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 HINFPQ9BQA5 517 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 TTLL2Q9BWV7 592 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 EPC1Q9H2F5 836 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 HPS4Q9NQG7 708 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 RBM12Q9NTZ6 932 aaKnown RBP12.67□□□□□ -0.38
TUBD1-203ENST00000346141 TRPM5Q9NZQ8 1165 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 NME7Q9Y5B8 376 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 CEP250Q9BV73 2442 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 ATP8B3O60423 1300 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 OBSL1O75147 1896 aa12.67□□□□□ -0.38
TUBD1-203ENST00000346141 KIF26AQ9ULI4 1882 aaPredicted RBP12.67□□□□□ -0.38
TUBD1-203ENST00000346141 F8VP50 259 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 IKBKBO14920 756 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 PAPSS2O95340 614 aaPredicted RBP12.66□□□□□ -0.38
TUBD1-203ENST00000346141 TCF3P15923 654 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 USP4Q13107 963 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 GAS6Q14393 721 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 MTF1Q14872 753 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 ZNF77Q15935 545 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 NFIL3Q16649 462 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 SGSM1Q2NKQ1 1148 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 ZACNQ401N2 412 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 TAF4BQ92750 862 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 EXOC4Q96A65 974 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 TNIP3Q96KP6 325 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 CYP2S1Q96SQ9 504 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 DPEP3Q9H4B8 488 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 EBF3Q9H4W6 596 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 SMYD3Q9H7B4 428 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 GCNT4Q9P109 453 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 ARHGAP26Q9UNA1 814 aa12.66□□□□□ -0.38
TUBD1-203ENST00000346141 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
TUBD1-203ENST00000346141 TRDMT1O14717 391 aaKnown RBP12.65□□□□□ -0.38
TUBD1-203ENST00000346141 ZNF202O95125 648 aa12.65□□□□□ -0.38
TUBD1-203ENST00000346141 VNN1O95497 513 aa12.65□□□□□ -0.38
TUBD1-203ENST00000346141 HDCP19113 662 aa12.65□□□□□ -0.38
TUBD1-203ENST00000346141 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
TUBD1-203ENST00000346141 USP46P62068 366 aa12.65□□□□□ -0.38
TUBD1-203ENST00000346141 DLG4P78352 724 aa12.65□□□□□ -0.38
TUBD1-203ENST00000346141 SATB1Q01826 763 aa12.65□□□□□ -0.38
TUBD1-203ENST00000346141 GRSF1Q12849 480 aaKnown RBP eCLIP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms