RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 KCTD14Q9BQ13 255 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 KDM6AO15550 1401 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 ABLIM1O14639 778 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 RAB25P57735 213 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 TSC22D2O75157 780 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 DGAT1O75907 488 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 RBP1P09455 135 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 CRKP46108 304 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 MROH7Q68CQ1 1323 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 IGSF1Q8N6C5 1336 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 SDR42E2A6NKP2 422 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 GYPCP04921 128 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 SLC16A1P53985 500 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 PPIDQ08752 370 aaKnown RBP20.03■□□□□ 0.8
HDAC4-201ENST00000345617 ITGA9Q13797 1035 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 TPCN2Q8NHX9 752 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 ATXN2LQ8WWM7 1075 aaKnown RBP20.03■□□□□ 0.8
HDAC4-201ENST00000345617 SH3BP4Q9P0V3 963 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 CHI3L1P36222 383 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-201ENST00000345617 IRGCQ6NXR0 463 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 IL1RL2Q9HB29 575 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 POLG2Q9UHN1 485 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 NLRP1Q9C000 1473 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 HEATR9A2RTY3 570 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 CES2O00748 559 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 C2CD6Q53TS8 623 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 ANKRD49Q8WVL7 239 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 HAO1Q9UJM8 370 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 MAPKAPK2P49137 400 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 RBP5P82980 135 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 FCHO2Q0JRZ9 810 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 SHC4Q6S5L8 630 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 MB21D2Q8IYB1 491 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-201ENST00000345617 BTBD3Q9Y2F9 522 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 USP17L8P0C7I0 530 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 C6orf203Q9P0P8 240 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-201ENST00000345617 ATP1A4Q13733 1029 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 MTF1Q14872 753 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 WDR36Q8NI36 951 aaKnown RBP20.03■□□□□ 0.8
HDAC4-201ENST00000345617 SORCS3Q9UPU3 1222 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 TBX3O15119 743 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 MFN2O95140 757 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 PRR29P0C7W0 189 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 ARHGEF7Q14155 803 aa20.03■□□□□ 0.8
HDAC4-201ENST00000345617 ITGAXP20702 1163 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 COILP38432 576 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-201ENST00000345617 PTRHD1Q6GMV3 140 aaKnown RBP20.02■□□□□ 0.8
HDAC4-201ENST00000345617 CHMP1BQ7LBR1 199 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 L3MBTL3Q96JM7 780 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-201ENST00000345617 DMAP1Q9NPF5 467 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-201ENST00000345617 FHOD1Q9Y613 1164 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 CYBBP04839 570 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 TMEM132DQ14C87 1099 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 STARD8Q92502 1023 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 USP6P35125 1406 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 UNC13BO14795 1591 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 SFI1A8K8P3 1242 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 GDF11O95390 407 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 IFNGR2P38484 337 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 HAUS6Q7Z4H7 955 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 ADSSL1Q8N142 457 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 REXO4Q9GZR2 422 aaKnown RBP20.02■□□□□ 0.8
HDAC4-201ENST00000345617 GGA2Q9UJY4 613 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 ZBTB1Q9Y2K1 713 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 AAR2Q9Y312 384 aaKnown RBP20.02■□□□□ 0.8
HDAC4-201ENST00000345617 CYP26A1O43174 497 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 PHGDHO43175 533 aaKnown RBP20.02■□□□□ 0.8
HDAC4-201ENST00000345617 FSBPO95073 299 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 PTGER2P43116 358 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 DENND1BQ6P3S1 775 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 FUT8Q9BYC5 575 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 ANKRD6Q9Y2G4 727 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 C2orf81A6NN90 581 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 F8W810 466 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 SOAT1P35610 550 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 TRAF3Q13114 568 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 MRNIPQ6NTE8 343 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 DENND6AQ8IWF6 608 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 MDM1Q8TC05 714 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 TSEN34Q9BSV6 310 aaKnown RBP20.02■□□□□ 0.8
HDAC4-201ENST00000345617 SLC7A5P2Q9GIP4 190 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 COA1Q9GZY4 146 aa20.02■□□□□ 0.8
HDAC4-201ENST00000345617 MYH14Q7Z406 1995 aaKnown RBP20.02■□□□□ 0.79
HDAC4-201ENST00000345617 SYNDIG1LA6NDD5 238 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 USP17L5A8MUK1 530 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 NAA20P61599 178 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 PDK2Q15119 407 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 PEG10Q86TG7 708 aaKnown RBP20.02■□□□□ 0.79
HDAC4-201ENST00000345617 FNIP1Q8TF40 1166 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 UGT2B28Q9BY64 529 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 TMBIM4Q9HC24 238 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 CCDC182A6NF36 153 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 AHCYL1O43865 530 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 CCT3P49368 545 aaKnown RBP20.02■□□□□ 0.79
HDAC4-201ENST00000345617 SLC9A5Q14940 896 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 DCAF4L1Q3SXM0 396 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 AIFM3Q96NN9 605 aa20.02■□□□□ 0.79
HDAC4-201ENST00000345617 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-201ENST00000345617 C1orf232A0A0U1RR37 186 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms