RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MAPRE1Q15691 268 aaKnown RBP12.54□□□□□ -0.4
COL12A1-202ENST00000345356 DUOXA2Q1HG44 320 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 NEDD1Q8NHV4 660 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 PI4K2AQ9BTU6 479 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 OSBPL7Q9BZF2 842 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 TRIM39Q9HCM9 518 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 TMEM161AQ9NX61 479 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 DDHD2O94830 711 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 MED26O95402 600 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 S100A1P23297 94 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 METTL23Q86XA0 190 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 OTULINQ96BN8 352 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 TMEM8AQ9HCN3 771 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 CDV3Q9UKY7 258 aaKnown RBP12.54□□□□□ -0.4
COL12A1-202ENST00000345356 DMTF1Q9Y222 760 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 EME2A4GXA9 379 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-202ENST00000345356 LRRC10BA6NIK2 292 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 NME5P56597 212 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 USP46P62068 366 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 PSMC5P62195 406 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 LIN52Q52LA3 116 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 DCLK3Q9C098 648 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 THAP1Q9NVV9 213 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 KCNK4Q9NYG8 393 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 TLR2O60603 784 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 CPA3P15088 417 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 GALNT15Q8N3T1 639 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 FNIP1Q8TF40 1166 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 PPP1R14BQ96C90 147 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 SRPK1Q96SB4 655 aaKnown RBP12.53□□□□□ -0.4
COL12A1-202ENST00000345356 RBBP8Q99708 897 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 FAM32AQ9Y421 112 aaKnown RBP12.53□□□□□ -0.4
COL12A1-202ENST00000345356 TMEM2Q9UHN6 1383 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 SLC26A4O43511 780 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 CASP4P49662 377 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 FOLH1Q04609 750 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 CSTF3Q12996 717 aaKnown RBP12.53□□□□□ -0.4
COL12A1-202ENST00000345356 PPP1R15BQ5SWA1 713 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 SH2D3AQ9BRG2 576 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 LRRC4BQ9NT99 713 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 USE1Q9NZ43 259 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 CLRN2A0PK11 232 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 AP3M2P53677 418 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 ITGA9Q13797 1035 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 MXD4Q14582 209 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-202ENST00000345356 OTUD3Q5T2D3 398 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-202ENST00000345356 ITFG2Q969R8 447 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 DUSP9Q99956 384 aaKnown RBP12.53□□□□□ -0.4
COL12A1-202ENST00000345356 GABBR1Q9UBS5 961 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 KIF1BO60333 1816 aa12.53□□□□□ -0.4
COL12A1-202ENST00000345356 DCXO43602 365 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 IDH3BO43837 385 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 NUDT17P0C025 328 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 FGFR3P22607 806 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 ADORA2BP29275 332 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 TTKP33981 857 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 ACOT2P49753 483 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 TFDP3Q5H9I0 405 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 SPDYAQ5MJ70 313 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 KRT35Q92764 455 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 A0A087X0B3 334 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 H0YC42 278 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 DFFAO00273 331 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 SSTR1P30872 391 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 WDR59Q6PJI9 974 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 C4orf22Q6V702 233 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 CYP2R1Q6VVX0 501 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 UTS2BQ765I0 119 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 LRRC8DQ7L1W4 858 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 SYTL1Q8IYJ3 562 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 C17orf50Q8WW18 174 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 IMPAD1Q9NX62 359 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.4
COL12A1-202ENST00000345356 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL12A1-202ENST00000345356 MMP13P45452 471 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 SCNN1BP51168 640 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 SIK1P57059 783 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 COG2Q14746 738 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 KIZQ2M2Z5 673 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 ZBTB46Q86UZ6 589 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 EXOC3L1Q86VI1 746 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 DHFR2Q86XF0 187 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 SEPT1Q8WYJ6 367 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 FAM237BA0A1B0GVD1 139 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 GRAP2O75791 330 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 GZMAP12544 262 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 BMP6P22004 513 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 IL5RAQ01344 420 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 NCOA4Q13772 614 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 LPIN1Q14693 890 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 TAF5Q15542 800 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 AGKQ53H12 422 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 CYP4A22Q5TCH4 519 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms