RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 PRR11Q96HE9 360 aaPredicted RBP24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 APOPT1Q96IL0 206 aa24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 CYTH2Q99418 400 aa24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 TCHPQ9BT92 498 aa24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 MRPL4Q9BYD3 311 aaKnown RBP24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 VPS33BQ9H267 617 aa24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 LHX5Q9H2C1 402 aa24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 KCNK13Q9HB14 408 aa24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 CPSF3Q9UKF6 684 aaKnown RBP24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 POLIQ9UNA4 740 aa24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 LOC285556D6RIA3 1793 aa24.18■■□□□ 1.46
NKX2-3-201ENST00000344586 APOC4-APOC2K7ER74 178 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 ABLIM1O14639 778 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 OGTO15294 1046 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 DNAJC6O75061 913 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 APOC2P02655 101 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 HOXC6P09630 235 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 ELK3P41970 407 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 TFAMQ00059 246 aaKnown RBP24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 PTK7Q13308 1070 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 CAPRIN2Q6IMN6 1127 aaKnown RBP24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 SH2D5Q6ZV89 423 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 XYLT1Q86Y38 959 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 PRPF31Q8WWY3 499 aaKnown RBP24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 CPXM1Q96SM3 734 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 PCSK1NQ9UHG2 260 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 TCRBV9S1A1TA0A576 114 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 CCDC22O60826 627 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 CD19P15391 556 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 ATP6V1C1P21283 382 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 DPYSL3Q14195 570 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 PRKD1Q15139 912 aaPredicted RBP24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 STXBP2Q15833 593 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 TEX9Q8N6V9 391 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 SLC44A1Q8WWI5 657 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 ACO2Q99798 780 aaKnown RBP24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 TMEM120AQ9BXJ8 343 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 OSBPL1AQ9BXW6 950 aa24.17■■□□□ 1.46
NKX2-3-201ENST00000344586 IQANK1A0A1B0GTG1 560 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 CFAP69A5D8W1 941 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 A6NHS1 94 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 KBTBD13C9JR72 458 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 ERBB2P04626 1255 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 RAP1GAPP47736 663 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 ARFIP2P53365 341 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 HIRAP54198 1017 aaPredicted RBP24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 CDK16Q00536 496 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 NBPF12Q5TAG4 269 aaPredicted RBP24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 KCTD6Q8NC69 237 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 CMASQ8NFW8 434 aaPredicted RBP24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 FAM111AQ96PZ2 611 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 BTBD10Q9BSF8 475 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 DCLRE1BQ9H816 532 aa24.16■■□□□ 1.46
NKX2-3-201ENST00000344586 MCF2LO15068 1137 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 LMNAP02545 664 aaKnown RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 RBP3P10745 1247 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 PTPRAP18433 802 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 KCNA3P22001 575 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 SERPINB3P29508 390 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 SLC18A2Q05940 514 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 FAAP100Q0VG06 881 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 KBTBD12Q3ZCT8 623 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 KHDC1Q4VXA5 237 aaKnown RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 CDCA2Q69YH5 1023 aaPredicted RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 ANO7Q6IWH7 933 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 HSPH1Q92598 858 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 C12orf42Q96LP6 360 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 AS3MTQ9HBK9 375 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 FBXO6Q9NRD1 293 aaPredicted RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 MAFO75444 373 aaPredicted RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 TGDSO95455 350 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 DLDP09622 509 aaKnown RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 UBA1P22314 1058 aaKnown RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 MIPP30301 263 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 EFNA5P52803 228 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 ZNF200P98182 395 aaPredicted RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 DSTYKQ6XUX3 929 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 MTO1Q9Y2Z2 717 aaKnown RBP24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 TEX264Q9Y6I9 313 aa24.15■■□□□ 1.46
NKX2-3-201ENST00000344586 BGNP21810 368 aa24.14■■□□□ 1.46
NKX2-3-201ENST00000344586 ZNF280AP59817 542 aaPredicted RBP24.14■■□□□ 1.46
NKX2-3-201ENST00000344586 KCNJ11Q14654 390 aa24.14■■□□□ 1.46
NKX2-3-201ENST00000344586 SPATA18Q8TC71 538 aa24.14■■□□□ 1.46
NKX2-3-201ENST00000344586 TTC17Q96AE7 1141 aa24.14■■□□□ 1.46
NKX2-3-201ENST00000344586 CNTN3Q9P232 1028 aa24.14■■□□□ 1.46
NKX2-3-201ENST00000344586 ZFATQ9P243 1243 aa24.14■■□□□ 1.46
NKX2-3-201ENST00000344586 NXF1Q9UBU9 619 aaKnown RBP24.14■■□□□ 1.46
NKX2-3-201ENST00000344586 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 EIF4E1BA6NMX2 242 aaKnown RBP24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 MED7O43513 233 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 PYGBP11216 843 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 DPEP1P16444 411 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 ORC1Q13415 861 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 NPNTQ6UXI9 565 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 NSL1Q96IY1 281 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 TUBB6Q9BUF5 446 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 CALN1Q9BXU9 219 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 SLC24A3Q9HC58 644 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 NRBP2Q9NSY0 501 aa24.14■■□□□ 1.45
NKX2-3-201ENST00000344586 SSC5DA1L4H1 1573 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms