RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CCDC137Q6PK04 289 aaKnown RBP14.28□□□□□ -0.12
CDC42-202ENST00000344548 DSTYKQ6XUX3 929 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 SND1Q7KZF4 910 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■□□□ 11.7
CDC42-202ENST00000344548 IFT20Q8IY31 132 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 TSEN2Q8NCE0 465 aaKnown RBP14.28□□□□□ -0.12
CDC42-202ENST00000344548 IPO4Q8TEX9 1081 aaKnown RBP14.28□□□□□ -0.12
CDC42-202ENST00000344548 FNIP1Q8TF40 1166 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 SLITRK1Q96PX8 696 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 OSBPL8Q9BZF1 889 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
CDC42-202ENST00000344548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDC42-202ENST00000344548 C3orf70A6NLC5 250 aaPredicted RBP14.27□□□□□ -0.12
CDC42-202ENST00000344548 TNFRSF8P28908 595 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 MIPP30301 263 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 TNNT3P45378 269 aaPredicted RBP14.27□□□□□ -0.12
CDC42-202ENST00000344548 NDUFV1P49821 464 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 BST2Q10589 180 aaKnown RBP14.27□□□□□ -0.12
CDC42-202ENST00000344548 CDO1Q16878 200 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 CCDC14Q49A88 953 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 SLC24A5Q71RS6 500 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 CTU1Q7Z7A3 348 aaKnown RBP14.27□□□□□ -0.12
CDC42-202ENST00000344548 JAMLQ86YT9 394 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 EXD1Q8NHP7 514 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 SCLYQ96I15 445 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 TMEM209Q96SK2 561 aa14.27□□□□□ -0.12
CDC42-202ENST00000344548 SCN5AQ14524 2016 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 GOLGA6L10A0A0M3HER8 536 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 KRT1P04264 644 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 SELPP16109 830 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 PDGFRAP16234 1089 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 COILP38432 576 aaPredicted RBP14.27□□□□□ -0.13
CDC42-202ENST00000344548 GATMP50440 423 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 ATXN1P54253 815 aaKnown RBP14.27□□□□□ -0.13
CDC42-202ENST00000344548 FAM189BP81408 668 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 ATP11AP98196 1134 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 GRIK3Q13003 919 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 TUSC3Q13454 348 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 HDXQ7Z353 690 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 PIGZQ86VD9 579 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 PGBD4Q96DM1 585 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 PCED1BQ96HM7 432 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 KCNK16Q96T55 309 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 HNRNPABQ99729 332 aaKnown RBP14.27□□□□□ -0.13
CDC42-202ENST00000344548 MAGEB5Q9BZ81 275 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 DNAJB4Q9UDY4 337 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 OGDHLQ9ULD0 1010 aa14.27□□□□□ -0.13
CDC42-202ENST00000344548 MCM3P25205 808 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 RPL9P32969 192 aaKnown RBP14.26□□□□□ -0.13
CDC42-202ENST00000344548 RPL34P49207 117 aaKnown RBP14.26□□□□□ -0.13
CDC42-202ENST00000344548 ZNF143P52747 638 aaPredicted RBP14.26□□□□□ -0.13
CDC42-202ENST00000344548 BCAT1P54687 386 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 SLC6A3Q01959 620 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 ZFYVE27Q5T4F4 411 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 CLEC20AQ6ZU45 233 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 MAATS1Q7Z4T9 603 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 PRUNE1Q86TP1 453 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 CCDC26Q8TAB7 109 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 SEC14L1Q92503 715 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 TNIP3Q96KP6 325 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 TMLHEQ9NVH6 421 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 CALCOCO1Q9P1Z2 691 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 SAE1Q9UBE0 346 aaPredicted RBP14.26□□□□□ -0.13
CDC42-202ENST00000344548 PCYOX1Q9UHG3 505 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 LRRD1A4D1F6 860 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 H3BQF6 201 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 RRP9O43818 475 aaKnown RBP14.26□□□□□ -0.13
CDC42-202ENST00000344548 GPD1P21695 349 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 CHRNA3P32297 505 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 SMC1AQ14683 1233 aaKnown RBP14.26□□□□□ -0.13
CDC42-202ENST00000344548 LRRC38Q5VT99 294 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 DUPD1Q68J44 220 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 SPOCD1Q6ZMY3 1216 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 ZMIZ2Q8NF64 920 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 STK32AQ8WU08 396 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 UBE2Q2Q8WVN8 375 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 SYT15Q9BQS2 421 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 DUSP16Q9BY84 665 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 UBXN6Q9BZV1 441 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 LRRC19Q9H756 370 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 OGFRQ9NZT2 677 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 SNX24Q9Y343 169 aa14.26□□□□□ -0.13
CDC42-202ENST00000344548 ENPP3O14638 875 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 ATP8B1O43520 1251 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 SETSIPP0DME0 302 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 HSPA6P17066 643 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 CDKN2BP42772 138 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 CCL23P55773 120 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 MAP3K7CLP57077 242 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 FAM182AQ5T1J6 154 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 GPRIN1Q7Z2K8 1008 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 LRRTM3Q86VH5 581 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 OR10T2Q8NGX3 314 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 RUBCNQ92622 972 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 HAUS1Q96CS2 278 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 ERP44Q9BS26 406 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 DCLK3Q9C098 648 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 HPCAL4Q9UM19 191 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 USP18Q9UMW8 372 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 TSC2P49815 1807 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 hCG_1818297A0A087WSY0 165 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms