RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 METTL8Q9H825 291 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 UBP1Q9NZI7 540 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TIAM1Q13009 1591 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ZBTB5O15062 677 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 MAGEC1O60732 1142 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 FAM58BPP0C7Q3 252 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 CPEP16870 476 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 NFE2Q16621 373 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 RANBP10Q6VN20 620 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TDRKHQ9Y2W6 561 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 FAM170BA6NMN3 283 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 C9IYK1 514 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TSTD3H0UI37 97 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 EIF2S3P41091 472 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 RXRGP48443 463 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SWI5Q1ZZU3 235 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 PDZK1Q5T2W1 519 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 C3orf33Q6P1S2 294 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 KRT25Q7Z3Z0 450 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 FAM162AQ96A26 154 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SLC4A5Q9BY07 1137 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SAV1Q9H4B6 383 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ANAPC7Q9UJX3 599 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ANKRD12Q6UB98 2062 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF804BA4D1E1 1349 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 J3QR89 54 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TNFRSF21O75509 655 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TOP3BO95985 862 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 HK2P52789 917 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 GSTM4Q03013 218 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 KCNAB1Q14722 419 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TCEAL5Q5H9L2 206 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 C4orf50Q6ZRC1 276 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 FAM172AQ8WUF8 416 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 FAR1Q8WVX9 515 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 POLR1EQ9GZS1 481 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SEC31BQ9NQW1 1179 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TUBE1Q9UJT0 475 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 C2orf71A6NGG8 1288 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 KPNA7A9QM74 516 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 S100A8P05109 93 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SAGP10523 405 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 NR4A1P22736 598 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 CBX5P45973 191 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 GRM2Q14416 872 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 EFTUD2Q15029 972 aaKnown RBP eCLIP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TSHZ3Q63HK5 1081 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SVIPQ8NHG7 77 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TEX47Q8TBZ9 253 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TRUB1Q8WWH5 349 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 GATA6Q92908 595 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF578Q96N58 590 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SCPEP1Q9HB40 452 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ASH2LQ9UBL3 628 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 VAV3Q9UKW4 847 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 GPR89AB7ZAQ6 455 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PIK3R2O00459 728 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GPR89BP0CG08 455 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 AP2S1P53680 142 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 HPCAP84074 193 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MOGQ16653 247 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TAF8Q7Z7C8 310 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PFDN5Q99471 154 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 JMJD4Q9H9V9 463 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 EML4Q9HC35 981 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PCDHGB3Q9Y5G1 929 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CDY2AQ9Y6F7 541 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CAMK2BQ13554 666 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 NFIL3Q16649 462 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 UBXN11Q5T124 520 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GALNT17Q6IS24 598 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ADAMTSL2Q86TH1 951 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GIMAP5Q96F15 307 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 YIPF2Q9BWQ6 316 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SLC12A6Q9UHW9 1150 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 AMFRQ9UKV5 643 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 YTHDC2Q9H6S0 1430 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MYBL1P10243 752 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 LPIN1Q14693 890 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TTC33Q6PID6 262 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 C8orf59Q8N0T1 100 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CD320Q9NPF0 282 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ABCG2Q9UNQ0 655 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FAM92AA1XBS5 289 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 BTNL10A8MVZ5 291 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PGM1P36871 562 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GUCY2DQ02846 1103 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CARTPTQ16568 116 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 IRAK1BP1Q5VVH5 260 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 LRRC17Q8N6Y2 441 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CREB3L1Q96BA8 519 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.89□□□□□ -1.799e-6■■■□□ 18.9
SYNE2-202ENST00000344113 NAPBQ9H115 298 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SSU72Q9NP77 194 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RAPGEF2Q9Y4G8 1499 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FAM228BP0C875 321 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 IL4RP24394 825 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 B2MP61769 119 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TAP1Q03518 808 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms