RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TMEM121Q9BTD3 319 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 MRIQ9BWK5 157 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 AP5M1Q9H0R1 490 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 DNALI1O14645 258 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 ZBTB39O15060 712 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 CREB1P16220 341 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 ATP6V1C1P21283 382 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 SSTR1P30872 391 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 RPA3P35244 121 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 CHKAP35790 457 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 FKBP1AP62942 108 aaKnown RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 TMEM132DQ14C87 1099 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 R3HDM1Q15032 1099 aaKnown RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 FBXO36Q8NEA4 188 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 PYDC1Q8WXC3 89 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 ZNF560Q96MR9 790 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 PAFAH2Q99487 392 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 NT5C1AQ9BXI3 368 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 SMARCAD1Q9H4L7 1026 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 KRT82Q9NSB4 513 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 GRID1Q9ULK0 1009 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 ABCC6O95255 1503 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 STMN1P16949 149 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 TAL1P17542 331 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 VCPP55072 806 aaKnown RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 OTUD4Q01804 1114 aaKnown RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 FOXD4Q12950 439 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 KIF19Q2TAC6 998 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 LRRC8EQ6NSJ5 796 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 DSTYKQ6XUX3 929 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 ZNF572Q7Z3I7 529 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 MAP4K3Q8IVH8 894 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 APLFQ8IW19 511 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 ZNF75CPQ92670 426 aaPredicted RBP11.33□□□□□ -0.6
RPL28-201ENST00000344063 HSD17B14Q9BPX1 270 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 NR2E1Q9Y466 385 aa11.33□□□□□ -0.6
RPL28-201ENST00000344063 TGFB1I1O43294 461 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 PSMG1O95456 288 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 FAM13CQ8NE31 585 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 TNIP3Q96KP6 325 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 SLC12A6Q9UHW9 1150 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 SUPT20HL2P0C7V6 817 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 PYGBP11216 843 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 ADORA2BP29275 332 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 RGS7P49802 495 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 COPAP53621 1224 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
RPL28-201ENST00000344063 ZNF513Q8N8E2 541 aaPredicted RBP11.32□□□□□ -0.6
RPL28-201ENST00000344063 ALG3Q92685 438 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 C20orf96Q9NUD7 363 aaPredicted RBP11.32□□□□□ -0.6
RPL28-201ENST00000344063 NMRK1Q9NWW6 199 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 TM9SF1O15321 606 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 TPST1O60507 370 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 ZSCAN5DPP0CG00 497 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 BMPR2Q13873 1038 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 TBCCQ15814 346 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 SLC15A2Q16348 729 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 KCNT1Q5JUK3 1230 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 LAYNQ6UX15 382 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 FAM71AQ8IYT1 594 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 RNF139Q8WU17 664 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 PGBD4Q96DM1 585 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 KCNK16Q96T55 309 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 TBC1D23Q9NUY8 699 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 CALCAP01258 141 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 OCA2Q04671 838 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 BLMHQ13867 455 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 TEDDM1Q5T9Z0 273 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 RWDD4Q6NW29 188 aaKnown RBP11.32□□□□□ -0.6
RPL28-201ENST00000344063 TRIM67Q6ZTA4 783 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 ZFPM1Q8IX07 1006 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 ACTL9Q8TC94 416 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 NRBF2Q96F24 287 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 LRRC19Q9H756 370 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 PXMP2Q9NR77 195 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 SNX9Q9Y5X1 595 aa11.32□□□□□ -0.6
RPL28-201ENST00000344063 MAGEB2O15479 319 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 CYP1A2P05177 515 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
RPL28-201ENST00000344063 ATICP31939 592 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 POU5F1BQ06416 359 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 RNF148Q8N7C7 305 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 CATSPER1Q8NEC5 780 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 ZSWIM2Q8NEG5 633 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 SHC3Q92529 594 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 KAT5Q92993 513 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 GORASP1Q9BQQ3 440 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPL28-201ENST00000344063 PACSIN3Q9UKS6 424 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 ASB14A6NK59 587 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 AP3B1O00203 1094 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 NUDT2P50583 147 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 FLOT2Q14254 428 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 OASLQ15646 514 aaKnown RBP11.31□□□□□ -0.6
RPL28-201ENST00000344063 MMP19Q99542 508 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms