RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PABPC3Q9H361 631 aaKnown RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 MKI67P46013 3256 aaKnown RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 ADAMTS4O75173 837 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 ASGR1P07306 291 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 PRKAR2AP13861 404 aaKnown RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 IL1R2P27930 398 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 COPS2P61201 443 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 TFDP3Q5H9I0 405 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 ZNF618Q5T7W0 954 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 PMF1Q6P1K2 205 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 SYDE1Q6ZW31 735 aaPredicted RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 SERINC5Q86VE9 423 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 APPL2Q8NEU8 664 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 KBTBD7Q8WVZ9 684 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 PIWIL1Q96J94 861 aaKnown RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 SNX25Q9H3E2 840 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 PCSK1NQ9UHG2 260 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 GRAP2O75791 330 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 CHRNA1P02708 482 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 KRT7P08729 469 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 FGFR1P11362 822 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 GNL1P36915 607 aaPredicted RBP19.54■□□□□ 0.72
HOXA9-201ENST00000343483 KCNA10Q16322 511 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 SV2CQ496J9 727 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 DENND2CQ68D51 928 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 ART4Q93070 314 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 SENP6Q9GZR1 1112 aaPredicted RBP19.54■□□□□ 0.72
HOXA9-201ENST00000343483 EPB41L4BQ9H329 900 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 GDAP2Q9NXN4 497 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 NOVA2Q9UNW9 492 aaKnown RBP19.54■□□□□ 0.72
HOXA9-201ENST00000343483 TRIM17Q9Y577 477 aa19.54■□□□□ 0.72
HOXA9-201ENST00000343483 hCG_1818297A0A087WSY0 165 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 MEIS3P2A8K0S8 358 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 PTGESO14684 152 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 RNF8O76064 485 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 LMO2P25791 158 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 CDKN2BP42772 138 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 VPS41P49754 854 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 PTK6Q13882 451 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 PKDCCQ504Y2 493 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 LRRC4CQ9HCJ2 640 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 NUDT17P0C025 328 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 CCDC130P13994 396 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 ADORA2BP29275 332 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 ZNF365Q70YC5 407 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 GSTA5Q7RTV2 222 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 HOOK3Q86VS8 718 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 HAUS1Q96CS2 278 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 FAM105AQ9NUU6 356 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 ASNSD1Q9NWL6 643 aa19.53■□□□□ 0.72
HOXA9-201ENST00000343483 EBAG9O00559 213 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 NDUFAB1O14561 156 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 HUS1O60921 280 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 SHBGP04278 402 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 ATF2P15336 505 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 PDGFRAP16234 1089 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 GPD1P21695 349 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 MIPP30301 263 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 PTPN7P35236 360 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 ADCY8P40145 1251 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 THPOP40225 353 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 MLH1P40692 756 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 ZNF143P52747 638 aaPredicted RBP19.52■□□□□ 0.72
HOXA9-201ENST00000343483 LILRA4P59901 499 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 PDE4CQ08493 712 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 ADGRF2Q8IZF7 708 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 SNF8Q96H20 258 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 EPN3Q9H201 632 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 WHRNQ9P202 907 aa19.52■□□□□ 0.72
HOXA9-201ENST00000343483 C3orf70A6NLC5 250 aaPredicted RBP19.52■□□□□ 0.71
HOXA9-201ENST00000343483 MYO1CO00159 1063 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 LIASO43766 372 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 MAGOHP61326 146 aaKnown RBP19.52■□□□□ 0.71
HOXA9-201ENST00000343483 PPP2R2AP63151 447 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 PTGISQ16647 500 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 SCUBE3Q8IX30 993 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 SLC35F5Q8WV83 523 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 RXFP2Q8WXD0 754 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 HSPH1Q92598 858 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 PPP1R10Q96QC0 940 aaKnown RBP19.52■□□□□ 0.71
HOXA9-201ENST00000343483 DNPEPQ9ULA0 475 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 USP18Q9UMW8 372 aa19.52■□□□□ 0.71
HOXA9-201ENST00000343483 SCN10AQ9Y5Y9 1956 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 C2CD4BA6NLJ0 364 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 SETSIPP0DME0 302 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 DYNLT1P63172 113 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 NKX3-2P78367 333 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 BYSLQ13895 437 aaKnown RBP19.51■□□□□ 0.71
HOXA9-201ENST00000343483 SLMAPQ14BN4 828 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 ACAP1Q15027 740 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 CDO1Q16878 200 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 SH3PXD2AQ5TCZ1 1133 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 ARHGAP17Q68EM7 881 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 TRNP1Q6NT89 227 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 OLFML1Q6UWY5 402 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 CCDC25Q86WR0 208 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 LPPQ93052 612 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 CNPY3Q9BT09 278 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 SLC4A5Q9BY07 1137 aa19.51■□□□□ 0.71
HOXA9-201ENST00000343483 FAM129AQ9BZQ8 928 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms