RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 KCNV1Q6PIU1 500 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 ERP27Q96DN0 273 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 LEMD3Q9Y2U8 911 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 TNFAIP8O95379 198 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 PRKAR2AP13861 404 aaKnown RBP18.22■□□□□ 0.51
SMAD4-201ENST00000342988 C4orf46Q504U0 113 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 EXOC3L1Q86VI1 746 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 C18orf8Q96DM3 657 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 SNX8Q9Y5X2 465 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 ADCY6O43306 1168 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 ALDH3A2P51648 485 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 MTHFSDQ2M296 383 aaKnown RBP18.22■□□□□ 0.51
SMAD4-201ENST00000342988 PGBD2Q6P3X8 592 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 C3orf62Q6ZUJ4 267 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 RAB11FIP2Q7L804 512 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 ITCHQ96J02 903 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 DUSP12Q9UNI6 340 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 UHRF1BP1LA0JNW5 1464 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 PHF2O75151 1096 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 PTPN7P35236 360 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 ATP1A4Q13733 1029 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 POLNQ7Z5Q5 900 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 STARD8Q92502 1023 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 PLA2G4FQ68DD2 849 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 CRLS1Q9UJA2 301 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 TNRQ92752 1358 aa18.22■□□□□ 0.51
SMAD4-201ENST00000342988 G3V2T6 193 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 VPS26AO75436 327 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 TRPC4APQ8TEL6 797 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 VPS51Q9UID3 782 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 RPS6KA5O75582 802 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 HK2P52789 917 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 DLG1Q12959 904 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 MINDY2Q8NBR6 621 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 PYCARDQ9ULZ3 195 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 TRAPPC9Q96Q05 1148 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 NOL6Q9H6R4 1146 aaKnown RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ENTPD7Q9NQZ7 604 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 MCUBQ9NWR8 336 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 BCS1LQ9Y276 419 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 TNFRSF21O75509 655 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ATG7O95352 703 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 MOCS2O96007 188 aaPredicted RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 DSG3P32926 999 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ACADSBP45954 432 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 MAD2L1Q13257 205 aaPredicted RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ATP6AP1LQ52LC2 224 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 FICDQ9BVA6 458 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ROPN1BQ9BZX4 212 aaPredicted RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ROPN1Q9HAT0 212 aaPredicted RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 RBAKQ9NYW8 714 aaPredicted RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ZNF804BA4D1E1 1349 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 SKAP2O75563 359 aaPredicted RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 HLA-DQA2P01906 255 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 SLC52A2Q9HAB3 445 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 NR3C2P08235 984 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ADORA2BP29275 332 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 HPCAL1P37235 193 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 BIKQ13323 160 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 FUT11Q495W5 492 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 ZNF473Q8WTR7 871 aaKnown RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 EEF1AKMT1Q8WVE0 214 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 SLC4A9Q96Q91 983 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 SLC38A7Q9NVC3 462 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 MTMR6Q9Y217 621 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 NEU2Q9Y3R4 380 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 SPEF1Q9Y4P9 236 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 PRELPP51888 382 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 UTP15Q8TED0 518 aaKnown RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 RIN2Q8WYP3 895 aaPredicted RBP18.21■□□□□ 0.51
SMAD4-201ENST00000342988 EMC3Q9P0I2 261 aa18.21■□□□□ 0.51
SMAD4-201ENST00000342988 SLCO1B7G3V0H7 640 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 TADA2AO75478 443 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 NCAPD2Q15021 1401 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 CCDC153Q494R4 210 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 RP9Q8TA86 221 aaKnown RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 NUAK2Q9H093 628 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 DCLRE1BQ9H816 532 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 MYO5CQ9NQX4 1742 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 RASSF1Q9NS23 344 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 PRKAG3Q9UGI9 489 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 OR6A2O95222 327 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 CHRM3P20309 590 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 HOXC8P31273 242 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 ZFP1Q6P2D0 407 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 KDELC2Q7Z4H8 507 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 RNPC3Q96LT9 517 aaKnown RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 XRCC4Q13426 336 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 PHACTR4Q8IZ21 702 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 KCTD17Q8N5Z5 321 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 SERAC1Q96JX3 654 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 RBM15Q96T37 977 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 CRNNQ9UBG3 495 aaPredicted RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 ZNF222Q9UK12 451 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 PRKAR1AP10644 381 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 SCUBE1Q8IWY4 988 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms