RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.48□□□□□ -1.21
VCAN-202ENST00000342785 KLK14Q9P0G3 267 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 INSRRP14616 1297 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 ACO1P21399 889 aaKnown RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 CACNB2Q08289 660 aaPredicted RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 SNAPC2Q13487 334 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 CNGA2Q16280 664 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 ASTE1Q2TB18 679 aaPredicted RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 ZNF484Q5JVG2 852 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 TCP10LQ8TDR4 215 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 PDCD6IPQ8WUM4 868 aaKnown RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 PTPRN2Q92932 1015 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 CENPTQ96BT3 561 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 PWWP2AQ96N64 755 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 ABCF3Q9NUQ8 709 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 TMEM51Q9NW97 253 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 SLC39A10Q9ULF5 831 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 IGKV6D-41A0A0C4DH26 115 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 AIM2O14862 343 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 BNIP3LO60238 219 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ENO3P13929 434 aaPredicted RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 OAZ1P54368 228 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 MAMLD1Q13495 774 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 NOTUMQ6P988 496 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 LCA5Q86VQ0 697 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ERO1BQ86YB8 467 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 C12orf56Q8IXR9 622 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ASAP3Q8TDY4 903 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 NAT9Q9BTE0 207 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 PORCNQ9H237 461 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ERVK-5Q9HDB9 667 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 C20orf96Q9NUD7 363 aaPredicted RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 SAE1Q9UBE0 346 aaPredicted RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 NR2E1Q9Y466 385 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 M0QYT0 321 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 C6orf222P0C671 652 aaPredicted RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 GLRA2P23416 452 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 EEF1B2P24534 225 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 CLK2P49760 499 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 TSTA3Q13630 321 aaPredicted RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 RASGEF1CQ8N431 466 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 OR5B17Q8NGF7 314 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 DDIT4Q9NX09 232 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ZNF189O75820 626 aaPredicted RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 MIPP30301 263 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ZCCHC9Q8N567 271 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 SEMA4DQ92854 862 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 CMTM5Q96DZ9 223 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 IFT43Q96FT9 208 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 DRC3Q9H069 523 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 TRPV6Q9H1D0 765 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 BCAS3Q9H6U6 928 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 CDY2AQ9Y6F7 541 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 CDY1Q9Y6F8 540 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 SDR42E2A6NKP2 422 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 MTSS1O43312 755 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 BGNP21810 368 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 IL1RL1Q01638 556 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 EFTUD2Q15029 972 aaKnown RBP eCLIP7.47□□□□□ -1.21
VCAN-202ENST00000342785 LY6KQ17RY6 165 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 DAB2IPQ5VWQ8 1189 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 EXOC3L1Q86VI1 746 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 KIRREL3Q8IZU9 778 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ICA1LQ8NDH6 482 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ART4Q93070 314 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 PABPC5Q96DU9 382 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 SGF29Q96ES7 293 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 TBCBQ99426 244 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 NEUROG2Q9H2A3 272 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 SP110Q9HB58 689 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 GGA2Q9UJY4 613 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 TSPAN16Q9UKR8 245 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 AP4E1Q9UPM8 1137 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 TCHHQ07283 1943 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 IGLV3-22A0A075B6J6 115 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 KDM4FA0A1W2PPD8 638 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 FANCGO15287 622 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 PFDN1O60925 122 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 VTNP04004 478 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 PYGBP11216 843 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 NCAM1P13591 858 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 DRD4P21917 467 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 PCSK1P29120 753 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 AQP5P55064 265 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 RPL7AP62424 266 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 R3HDM1Q15032 1099 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 UGCGQ16739 394 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 LLGL2Q6P1M3 1020 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 TFB1MQ8WVM0 346 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 CKAP2Q8WWK9 683 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 FGD4Q96M96 766 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 P2RX7Q99572 595 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 ASB7Q9H672 318 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ANLNQ9NQW6 1124 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 RRN3P2A6NIE6 340 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 PLSCR1O15162 318 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ATP6V1G2O95670 118 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 PTPN4P29074 926 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms