RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 XAB2Q9HCS7 855 aaKnown RBP20.39■□□□□ 0.85
SEMA6C-201ENST00000341697 SMG5Q9UPR3 1016 aaKnown RBP20.39■□□□□ 0.85
SEMA6C-201ENST00000341697 ZNF197O14709 1029 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 MAP3K7O43318 606 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 TMCC1O94876 653 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 CASP5P51878 434 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 KPNA1P52294 538 aaPredicted RBP20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 C3orf62Q6ZUJ4 267 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 GPR63Q9BZJ6 419 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 FAM129AQ9BZQ8 928 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 LACRTQ9GZZ8 138 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 CASZ1Q86V15 1759 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 USP10Q14694 798 aaKnown RBP20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 RAB42Q8N4Z0 105 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 TLR8Q9NR97 1041 aaKnown RBP20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 GPATCH2LQ9NWQ4 482 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 USH1CQ9Y6N9 552 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 PPP1R11O60927 126 aaPredicted RBP20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 PRLRP16471 622 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 ZDHHC17Q8IUH5 632 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 SMARCD1Q96GM5 515 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 SPECC1L-ADORA2AF8WAN1 911 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 GFAPP14136 432 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 SPRP35270 261 aaPredicted RBP20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 ITGB3BPQ13352 177 aaPredicted RBP20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 ZNF268Q14587 947 aaPredicted RBP20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 TTC30BQ8N4P2 665 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 EXD1Q8NHP7 514 aa20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 N4BP2L2Q92802 583 aaPredicted RBP20.38■□□□□ 0.85
SEMA6C-201ENST00000341697 DIAPH2O60879 1101 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 VCPIP1Q96JH7 1222 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 CDK5RAP1Q96SZ6 601 aaKnown RBP20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 VIPAS39Q9H9C1 493 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 KIF3CO14782 793 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 SPATA31C1P0DKV0 1188 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 CDH8P55286 799 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 CAPSQ13938 189 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 IKBKEQ14164 716 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 SNCBQ16143 134 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 CBWD6Q4V339 395 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 CBWD3Q5JTY5 395 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 CBWD5Q5RIA9 395 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 KIAA0319LQ8IZA0 1049 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 NOA1Q8NC60 698 aaKnown RBP20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 DCTN4Q9UJW0 460 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 GOLGA8RI6L899 631 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 HIST1H2AGP0C0S8 130 aaPredicted RBP20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 HIST1H2ADP20671 130 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 ARFIP2P53365 341 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 GEMP55040 296 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 KYNUQ16719 465 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 LONRF1Q17RB8 773 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 SYTL3Q4VX76 610 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 GJC2Q5T442 439 aaPredicted RBP20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 TIGD7Q6NT04 549 aaPredicted RBP20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 HIST1H2AHQ96KK5 128 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 HIST1H2AJQ99878 128 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 H2AFJQ9BTM1 129 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 MAF1Q9H063 256 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 AFDNP55196 1824 aaKnown RBP20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 HADHAP40939 763 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 CARSP49589 748 aaKnown RBP20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 FLT3LGP49771 235 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 CCDC15Q0P6D6 951 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 MAPK7Q13164 816 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 DDX42Q86XP3 938 aaKnown RBP eCLIP20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 ELMO2Q96JJ3 720 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 RRN3Q9NYV6 651 aa20.37■□□□□ 0.85
SEMA6C-201ENST00000341697 ANGPTL8Q6UXH0 198 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 USP13Q92995 863 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 RIPK3Q9Y572 518 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 KLRC4O43908 158 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 FARP2O94887 1054 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 AVPR1AP37288 418 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 CLNS1AP54105 237 aaKnown RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 POLD3Q15054 466 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 DUSP28Q4G0W2 176 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 TMEM86AQ8N2M4 240 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 NFKBIEO00221 500 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 PMPCBO75439 489 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 RALBP11234 206 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 RTP1P59025 263 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 COL9A3Q14050 684 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 EML4Q9HC35 981 aaKnown RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 CFAP99D6REC4 459 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 MICAL2O94851 1124 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 IL1RL1Q01638 556 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 SPOCD1Q6ZMY3 1216 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 GLIS3Q8NEA6 775 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 PPTC7Q8NI37 304 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 ELOVL4Q9GZR5 314 aa20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 DMAP1Q9NPF5 467 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 ASTN2O75129 1339 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-201ENST00000341697 LYPLA2O95372 231 aa20.35■□□□□ 0.85
SEMA6C-201ENST00000341697 RBBP7Q16576 425 aa20.35■□□□□ 0.85
SEMA6C-201ENST00000341697 SPRYD7Q5W111 196 aa20.35■□□□□ 0.85
SEMA6C-201ENST00000341697 C11orf63Q6NUN7 778 aa20.35■□□□□ 0.85
SEMA6C-201ENST00000341697 ELMO3Q96BJ8 720 aa20.35■□□□□ 0.85
SEMA6C-201ENST00000341697 UPF3AQ9H1J1 476 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms