RNA–Protein interactions for RNA: ENST00000341491.8

ATF3-202, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-202ENST00000341491 MCRS1Q96EZ8 462 aa14.42□□□□□ -0.1
ATF3-202ENST00000341491 PEBP4Q96S96 227 aa14.42□□□□□ -0.1
ATF3-202ENST00000341491 TRIM51Q9BSJ1 452 aa14.42□□□□□ -0.1
ATF3-202ENST00000341491 MAGEB5Q9BZ81 275 aa14.42□□□□□ -0.1
ATF3-202ENST00000341491 IP6K2Q9UHH9 426 aa14.42□□□□□ -0.1
ATF3-202ENST00000341491 TMEM59LQ9UK28 342 aa14.42□□□□□ -0.1
ATF3-202ENST00000341491 ALPK3Q96L96 1907 aa14.42□□□□□ -0.1
ATF3-202ENST00000341491 CCDC66A2RUB6 948 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 SIGLEC16A6NMB1 481 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 TBKBP1A7MCY6 615 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 MIF4GDA9UHW6 222 aaKnown RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 LRCH4O75427 683 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 HSPA1AP0DMV8 641 aaKnown RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 HSPA1BP0DMV9 641 aaKnown RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 GABRB2P47870 512 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 AARSP49588 968 aaKnown RBP eCLIP14.41□□□□□ -0.1
ATF3-202ENST00000341491 BCAT1P54687 386 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 PITX1P78337 314 aaPredicted RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 FAM189BP81408 668 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 SNX1Q13596 522 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 CLEC20AQ6ZU45 233 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 ANKRD33Q7Z3H0 272 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 FAM35AQ86V20 835 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 PIGZQ86VD9 579 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 DDX42Q86XP3 938 aaKnown RBP eCLIP14.41□□□□□ -0.1
ATF3-202ENST00000341491 ANKRD52Q8NB46 1076 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 C1orf54Q8WWF1 131 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 RXFP2Q8WXD0 754 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 RAPGEF5Q92565 580 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 SEPT8Q92599 483 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 KHSRPQ92945 711 aaKnown RBP eCLIP14.41□□□□□ -0.1
ATF3-202ENST00000341491 HAUS1Q96CS2 278 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 CASD1Q96PB1 797 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 NRDE2Q9H7Z3 1164 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 TMEM39AQ9NV64 488 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 GPATCH2LQ9NWQ4 482 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 STRIP2Q9ULQ0 834 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 R3HDM2Q9Y2K5 976 aaKnown RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 PCDHB7Q9Y5E2 793 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 TTI1O43156 1089 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 KRT1P04264 644 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 CD48P09326 243 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 ACRP10323 421 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 RALAP11233 206 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 ODC1P11926 461 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 COL6A1P12109 1028 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 SKIP12755 728 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 RPL9P32969 192 aaKnown RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 KCNJ1P48048 391 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 DSC1Q08554 894 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 IFRD2Q12894 506 aaPredicted RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 TTC27Q6P3X3 843 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 HFE2Q6ZVN8 426 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 CEP57Q86XR8 500 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 ABI1Q8IZP0 508 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 ZMIZ2Q8NF64 920 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 URGCPQ8TCY9 931 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 BCL7CQ8WUZ0 217 aaPredicted RBP14.41□□□□□ -0.1
ATF3-202ENST00000341491 TNIP3Q96KP6 325 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 TSPAN18Q96SJ8 248 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 SMOQ99835 787 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 SLC4A5Q9BY07 1137 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 TRIM31Q9BZY9 425 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 TMEM161AQ9NX61 479 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 LRFN2Q9ULH4 789 aa14.41□□□□□ -0.1
ATF3-202ENST00000341491 SYNJ2BP-COX16A0A087WUM0 186 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 AP1G2O75843 785 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 HEXIM1O94992 359 aaKnown RBP14.4□□□□□ -0.1
ATF3-202ENST00000341491 EOMESO95936 686 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 RARAP10276 462 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 BDNFP23560 247 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 GUCY2DQ02846 1103 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 ZNF268Q14587 947 aaPredicted RBP14.4□□□□□ -0.1
ATF3-202ENST00000341491 SIX1Q15475 284 aaPredicted RBP14.4□□□□□ -0.1
ATF3-202ENST00000341491 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 TTC39CQ8N584 583 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 HSPH1Q92598 858 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 FAM193BQ96PV7 902 aaPredicted RBP14.4□□□□□ -0.1
ATF3-202ENST00000341491 COX16Q9P0S2 106 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 CALCOCO1Q9P1Z2 691 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 TBX21Q9UL17 535 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 KIAA1257Q9ULG3 409 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 COL4A6Q14031 1691 aa14.4□□□□□ -0.1
ATF3-202ENST00000341491 TRIM43BA6NCK2 446 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 CES2O00748 559 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 SART1O43290 800 aaKnown RBP14.39□□□□□ -0.11
ATF3-202ENST00000341491 PDGFRAP16234 1089 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 SLC11A1P49279 550 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 SLC25A11Q02978 314 aaKnown RBP14.39□□□□□ -0.11
ATF3-202ENST00000341491 SMC1AQ14683 1233 aaKnown RBP14.39□□□□□ -0.11
ATF3-202ENST00000341491 OVOS1Q6IE37 1185 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 MFSD7Q6UXD7 560 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 PRUNE1Q86TP1 453 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 SLC13A5Q86YT5 568 aaPredicted RBP14.39□□□□□ -0.11
ATF3-202ENST00000341491 RHOT1Q8IXI2 618 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 PRELID2Q8N945 189 aa14.39□□□□□ -0.11
ATF3-202ENST00000341491 TRIM43Q96BQ3 446 aaPredicted RBP14.39□□□□□ -0.11
ATF3-202ENST00000341491 PGLYRP2Q96PD5 576 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms