RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 PALB2Q86YC2 1186 aa10.94□□□□□ -0.66
CAPRIN1-201ENST00000341394 POU5F2Q8N7G0 328 aa10.94□□□□□ -0.66
CAPRIN1-201ENST00000341394 CEP120Q8N960 986 aa10.94□□□□□ -0.66
CAPRIN1-201ENST00000341394 MAIP1Q8WWC4 291 aa10.94□□□□□ -0.66
CAPRIN1-201ENST00000341394 MCEEQ96PE7 176 aa10.94□□□□□ -0.66
CAPRIN1-201ENST00000341394 STOML1Q9UBI4 398 aa10.94□□□□□ -0.66
CAPRIN1-201ENST00000341394 SLC16A3O15427 465 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 SP3Q02447 781 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 ITKQ08881 620 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 CBWD6Q4V339 395 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 CBWD3Q5JTY5 395 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 CBWD5Q5RIA9 395 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 MROH9Q5TGP6 573 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 ZNF467Q7Z7K2 595 aaPredicted RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 ATP2A3Q93084 1043 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 SLC35C1Q96A29 364 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 APBA2Q99767 749 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 NIFKQ9BYG3 293 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 STK33Q9BYT3 514 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 SETD4Q9NVD3 440 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 PHTF1Q9UMS5 762 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 TRIP12Q14669 1992 aaPredicted RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 AGTP01019 485 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 GSTA1P08263 222 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 GSTA2P09210 222 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 ETS2P15036 469 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 NAMPTP43490 491 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 ELF3P78545 371 aaPredicted RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 CAP1Q01518 475 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 LAMTOR4Q0VGL1 99 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 MAP7Q14244 749 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 TAF1BQ53T94 588 aaPredicted RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 BAP1Q92560 729 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 OSBPL7Q9BZF2 842 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 ARHGAP39Q9C0H5 1083 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 DHX33Q9H6R0 707 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 IGKV6D-21A0A0A0MT36 114 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 GOLGA8CPA6NN73 597 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 MIF4GDA9UHW6 222 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 ZBTB42B2RXF5 422 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 MAFO75444 373 aaPredicted RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 CRCPO75575 148 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 FECHP22830 423 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 HTRA3P83110 453 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 KLC1Q07866 573 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 ASPHQ12797 758 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 BMPR2Q13873 1038 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 SNRNP35Q16560 246 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 PPTC7Q8NI37 304 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 RAET1EQ8TD07 263 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 TRAIPQ9BWF2 469 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 PCMTD2Q9NV79 361 aa10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 AGO2Q9UKV8 859 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-201ENST00000341394 FAM47DPA6NHR8 397 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 TRAPPC3O43617 180 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 ZBED1O96006 694 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 VTNP04004 478 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 EEF1B2P24534 225 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 SSTR1P30872 391 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 ABCD1P33897 745 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 MARSP56192 900 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 WNT7BP56706 349 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 ZNF484Q5JVG2 852 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 LAYNQ6UX15 382 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 SLC13A5Q86YT5 568 aaPredicted RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 MYLK4Q86YV6 388 aaPredicted RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 NUDCD3Q8IVD9 361 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 HACE1Q8IYU2 909 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 CNPY4Q8N129 248 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 TATDN2Q93075 761 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 NMD3Q96D46 503 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 TRIM56Q9BRZ2 755 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 OSBPL8Q9BZF1 889 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 FAM129AQ9BZQ8 928 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 KATNBL1Q9H079 304 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 V9GYQ6 96 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 NVLO15381 856 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 MAGEB2O15479 319 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 DCTN3O75935 186 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 MT-CO1P00395 513 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 PRKCBP05771 671 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 RARAP10276 462 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 EFNA5P52803 228 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 NCKAP1LP55160 1127 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 RPS6KA2Q15349 733 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 SLFN12LQ6IEE8 588 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 DEPDC1BQ8WUY9 529 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 XAB2Q9HCS7 855 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 ACSS2Q9NR19 701 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 MEI4A8MW99 385 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 KRT16P08779 473 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 HOXD10P28358 340 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 CTGFP29279 349 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 TRIP10Q15642 601 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 MEA1Q16626 185 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 GPD1LQ8N335 351 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 EMC1Q8N766 993 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 PDZD8Q8NEN9 1154 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 ALG3Q92685 438 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms