RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 TSG101Q99816 390 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 CEP44Q9C0F1 390 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 KCTD10Q9H3F6 313 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 UVRAGQ9P2Y5 699 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 CEPT1Q9Y6K0 416 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ARHGAP10A1A4S6 786 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 KDM1AO60341 852 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 PTPRAP18433 802 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 CDH2P19022 906 aaPredicted RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 RCVRNP35243 200 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 HOXD13P35453 343 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 PGM1P36871 562 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 RPS6P62753 249 aaKnown RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 BTKQ06187 659 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 BORAQ6PGQ7 559 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 OTOAQ7RTW8 1153 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 CCDC25Q86WR0 208 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 PIP4K2CQ8TBX8 421 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 C18orf8Q96DM3 657 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 SH2D3AQ9BRG2 576 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 NUP85Q9BW27 656 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 KCNH7Q9NS40 1196 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 TRNAU1APQ9NX07 287 aaKnown RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 LZTS1Q9Y250 596 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 HAUS5O94927 633 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 RARBP10826 455 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 RAB15P59190 212 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 NOP14P78316 857 aaKnown RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 MRPS9P82933 396 aaKnown RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 FKBP3Q00688 224 aaKnown RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 GRM1Q13255 1194 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 NCOA4Q13772 614 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 E2F2Q14209 437 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 LPCAT4Q643R3 524 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 RINT1Q6NUQ1 792 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 PAOXQ6QHF9 649 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 C11orf74Q86VG3 221 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 KSR1Q8IVT5 923 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 LZTR1Q8N653 840 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 SYTL5Q8TDW5 730 aaPredicted RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 MXRA8Q9BRK3 442 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 AAASQ9NRG9 546 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 SCHIP1Q9P0W5 487 aaPredicted RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 TBK1Q9UHD2 729 aa12.38□□□□□ -0.43
RTN3-203ENST00000341307 RBMX2Q9Y388 322 aaKnown RBP12.38□□□□□ -0.43
RTN3-203ENST00000341307 RBBP6Q7Z6E9 1792 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 TNFRSF10AO00220 468 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 FGFR1P11362 822 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 PABPC1P11940 636 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 MZF1P28698 734 aaPredicted RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 BACE1P56817 501 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 ACTR3P61158 418 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 KLHL30Q0D2K2 578 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 SEPT7Q16181 437 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 MMEL1Q495T6 779 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 IL23RQ5VWK5 629 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 SPOPLQ6IQ16 392 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 TRMT10CQ7L0Y3 403 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 NET1Q7Z628 596 aaPredicted RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 IFNLR1Q8IU57 520 aaPredicted RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 ERI1Q8IV48 349 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 ART4Q93070 314 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 EHMT1Q9H9B1 1298 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 LIN28AQ9H9Z2 209 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 CLK4Q9HAZ1 481 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 NPHS2Q9NP85 383 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 PCDHGB4Q9UN71 923 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 PCDHGB5Q9Y5G0 923 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 COL4A3BPQ9Y5P4 624 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 FAM47DPA6NHR8 397 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 UNCXA6NJT0 531 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 VWA5AO00534 786 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 DDX3YO15523 660 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 PEX10O60683 326 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 FBXO21O94952 628 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 OCM2P0CE71 109 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 OCMP0CE72 109 aaPredicted RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 MYCLP12524 364 aaPredicted RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 PHKA2P46019 1235 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 KPNA1P52294 538 aaPredicted RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 PTK7Q13308 1070 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 RAPGEF1Q13905 1077 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 DCAF6Q58WW2 860 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 POTEHQ6S545 545 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 EPM2AIP1Q7L775 607 aaPredicted RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 ZNF280CQ8ND82 737 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 FAM172AQ8WUF8 416 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 GPATCH1Q9BRR8 931 aaKnown RBP12.37□□□□□ -0.43
RTN3-203ENST00000341307 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 IVNS1ABPQ9Y6Y0 642 aa12.37□□□□□ -0.43
RTN3-203ENST00000341307 MAGEC1O60732 1142 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 GCNT3O95395 438 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 CD48P09326 243 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 ATP6V1B1P15313 513 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms