RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 SLC39A10Q9ULF5 831 aa16.68■□□□□ 0.26
CCNY-202ENST00000339497 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
CCNY-202ENST00000339497 HNRNPH3P31942 346 aaKnown RBP16.68■□□□□ 0.26
CCNY-202ENST00000339497 PORCNQ9H237 461 aa16.68■□□□□ 0.26
CCNY-202ENST00000339497 NDFIP2Q9NV92 336 aa16.68■□□□□ 0.26
CCNY-202ENST00000339497 GRID1Q9ULK0 1009 aa16.68■□□□□ 0.26
CCNY-202ENST00000339497 BCAT1P54687 386 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 EFTUD2Q15029 972 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■■■■ 31.5
CCNY-202ENST00000339497 IRF2BP2Q7Z5L9 587 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 ADGRF2Q8IZF7 708 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 CACYBPQ9HB71 228 aaKnown RBP16.67■□□□□ 0.26
CCNY-202ENST00000339497 ARHGEF38Q9NXL2 777 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 AP4E1Q9UPM8 1137 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 L3MBTL1Q9Y468 752 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 TIMM13Q9Y5L4 95 aaPredicted RBP16.67■□□□□ 0.26
CCNY-202ENST00000339497 F8VP50 259 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 KIF3CO14782 793 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 AP2B1P63010 937 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 ITGB3BPQ13352 177 aaPredicted RBP16.67■□□□□ 0.26
CCNY-202ENST00000339497 NFIL3Q16649 462 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 UGCGQ16739 394 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 FBXO47Q5MNV8 452 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 HASPINQ8TF76 798 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 VAV3Q9UKW4 847 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 LTN1O94822 1766 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 PDHXO00330 501 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCNY-202ENST00000339497 MAP2K7O14733 419 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 GLRA2P23416 452 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 ETFBP38117 255 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 VCPP55072 806 aaKnown RBP16.67■□□□□ 0.26
CCNY-202ENST00000339497 HIC1Q14526 733 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 GRIK4Q16099 956 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 IL31Q6EBC2 164 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 EFHBQ8N7U6 833 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 SGF29Q96ES7 293 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 ZBTB18Q99592 522 aa16.67■□□□□ 0.26
CCNY-202ENST00000339497 AFF4Q9UHB7 1163 aaKnown RBP16.67■□□□□ 0.26
CCNY-202ENST00000339497 LACTBL1A8MY62 500 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 B2RBV5 119 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 IRF6O14896 467 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 RIPK2O43353 540 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 MARCKSL1P49006 195 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 IFI35P80217 286 aaPredicted RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 ELMO2Q96JJ3 720 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 FRMD8Q9BZ67 464 aaPredicted RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 VPS33BQ9H267 617 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 GBA2Q9HCG7 927 aaPredicted RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 ANLNQ9NQW6 1124 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 GDF3Q9NR23 364 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 PHTF1Q9UMS5 762 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 ACAT1P24752 427 aaKnown RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 PDK2Q15119 407 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 CATSPERGQ6ZRH7 1159 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 PPP1R13LQ8WUF5 828 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 CDCA5Q96FF9 252 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 PAFAH2Q99487 392 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 THTPAQ9BU02 230 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 TRPV6Q9H1D0 765 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 DNPEPQ9ULA0 475 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 BARX2Q9UMQ3 279 aaPredicted RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 BCL9LQ86UU0 1499 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 CES2O00748 559 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 ADORA2AP29274 412 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 ESRRGP62508 458 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 ANO4Q32M45 955 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 DNAJB3Q8WWF6 145 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 TMEM132BQ14DG7 1078 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 ANGPTL8Q6UXH0 198 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 SLFN11Q7Z7L1 901 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 CHSY1Q86X52 802 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 MIB1Q86YT6 1006 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 SPDYE1Q8NFV5 336 aaPredicted RBP16.66■□□□□ 0.26
CCNY-202ENST00000339497 VCPIP1Q96JH7 1222 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 CCDC138Q96M89 665 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 GLT1D1Q96MS3 346 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 SLC40A1Q9NP59 571 aa16.66■□□□□ 0.26
CCNY-202ENST00000339497 PDE1CQ14123 709 aaPredicted RBP16.65■□□□□ 0.26
CCNY-202ENST00000339497 LRRC36Q1X8D7 754 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 SCUBE3Q8IX30 993 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 GPC2Q8N158 579 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 AGGF1Q8N302 714 aaeCLIP16.65■□□□□ 0.263e-8■■■■■ 33.2
CCNY-202ENST00000339497 SHCBP1LQ9BZQ2 653 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 HSD3B7Q9H2F3 369 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 TRPC7Q9HCX4 862 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 MCF2P10911 925 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 PECAM1P16284 738 aaPredicted RBP16.65■□□□□ 0.26
CCNY-202ENST00000339497 TGM2P21980 687 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 ATICP31939 592 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 ADCYAP1R1P41586 468 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 MAP3K7CLP57077 242 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 HYIQ5T013 277 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 ANO5Q75V66 913 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 RPAINQ86UA6 219 aa16.65■□□□□ 0.26
CCNY-202ENST00000339497 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
CCNY-202ENST00000339497 ZSWIM2Q8NEG5 633 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms