RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 ABLIM1O14639 778 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 CLPTM1O96005 669 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 ANPEPP15144 967 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 SERPINB9P50453 376 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 SLC25A3Q00325 362 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 BST1Q10588 318 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 XKR3Q5GH77 459 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 SNRNP48Q6IEG0 339 aaKnown RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 CERS5Q8N5B7 392 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 MKL1Q969V6 931 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 ZDHHC15Q96MV8 337 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 DDX18Q9NVP1 670 aaKnown RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 ENTPD3O75355 529 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 USP1O94782 785 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 VIL1P09327 827 aaKnown RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 CCNB1P14635 433 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 SPIRE1Q08AE8 756 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 AP1B1Q10567 949 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 CYLC2Q14093 348 aaPredicted RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 EMC2Q15006 297 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 SGSM1Q2NKQ1 1148 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 ACSBG2Q5FVE4 666 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 CDKL3Q8IVW4 592 aaPredicted RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 MCUQ8NE86 351 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 EME1Q96AY2 570 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 TMA16Q96EY4 203 aaKnown RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 VCPIP1Q96JH7 1222 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 CLPTM1LQ96KA5 538 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 ASCC2Q9H1I8 757 aaPredicted RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 CLIC5Q9NZA1 410 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 IL1RAPL1Q9NZN1 696 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 WDR35Q9P2L0 1181 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 PCDHAC2Q9Y5I4 1007 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 GJA3Q9Y6H8 435 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 FER1L4A9Z1Z3 1794 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 FESP07332 822 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 GTF2BQ00403 316 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 TTLL12Q14166 644 aaPredicted RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 LBRQ14739 615 aaKnown RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 R3HDM1Q15032 1099 aaKnown RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 TBCCQ15814 346 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 TMCO4Q5TGY1 634 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 CDR2LQ86X02 465 aaPredicted RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 C4orf19Q8IY42 314 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 LRRC43Q8N309 656 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 RNF217Q8TC41 542 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 GDPD5Q8WTR4 605 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 MPP4Q96JB8 637 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
RIOK3-201ENST00000339486 TXLNGYQ9BZA5 131 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 EPB41L4BQ9H329 900 aa12.97□□□□□ -0.33
RIOK3-201ENST00000339486 ATP8B3O60423 1300 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 N4BP2Q86UW6 1770 aaPredicted RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 XPO1O14980 1071 aaKnown RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 NPTXRO95502 500 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 PROCP04070 461 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 CETPP11597 493 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 RPL22P35268 128 aaKnown RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 MTMR2Q13614 643 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 NFIL3Q16649 462 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 SYT15Q9BQS2 421 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 MECRQ9BV79 373 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 MTMR12Q9C0I1 747 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 ACSS3Q9H6R3 686 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 XAB2Q9HCS7 855 aaKnown RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 KLHL8Q9P2G9 620 aaPredicted RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 MID2Q9UJV3 735 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 ARHGAP26Q9UNA1 814 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 WASF2Q9Y6W5 498 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 PGM3O95394 542 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 NUDT2P50583 147 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 NLRP11P59045 1033 aaKnown RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 PRAMEP78395 509 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 SPP2Q13103 211 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 GALNTL6Q49A17 601 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 TTC7BQ86TV6 843 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 MAP4K3Q8IVH8 894 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 UBA3Q8TBC4 463 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 HELQQ8TDG4 1101 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 PRMT6Q96LA8 375 aaPredicted RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 AGAP3Q96P47 875 aa12.96□□□□□ -0.33
RIOK3-201ENST00000339486 AGO4Q9HCK5 861 aaKnown RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 STX18Q9P2W9 335 aaKnown RBP12.96□□□□□ -0.33
RIOK3-201ENST00000339486 GMNNO75496 209 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 FLOT2Q14254 428 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 PDZD4Q76G19 769 aaPredicted RBP12.96□□□□□ -0.34
RIOK3-201ENST00000339486 SESTD1Q86VW0 696 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 ZC3H3Q8IXZ2 948 aaKnown RBP12.96□□□□□ -0.34
RIOK3-201ENST00000339486 NIM1KQ8IY84 436 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 RNF149Q8NC42 400 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 C10orf82Q8WW14 230 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 ZBTB45Q96K62 511 aaPredicted RBP12.96□□□□□ -0.34
RIOK3-201ENST00000339486 GORASP1Q9BQQ3 440 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 HAUS8Q9BT25 410 aa12.96□□□□□ -0.34
RIOK3-201ENST00000339486 C17orf75Q9HAS0 396 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms