RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SLAIN1Q8ND83 568 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 CFAP57Q96MR6 1250 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 C2CD4BA6NLJ0 364 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 ZNF623O75123 536 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 ECEL1O95672 775 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 LCP1P13796 627 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 GPD1P21695 349 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 MIPP30301 263 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 PLTPP55058 493 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 ATP11AP98196 1134 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 BST2Q10589 180 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 PPP1R7Q15435 360 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 TRIP13Q15645 432 aaPredicted RBP23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 FAM26DQ5JW98 314 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 MAIP1Q8WWC4 291 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 TNIP3Q96KP6 325 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 RNF8O76064 485 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 ZNF143P52747 638 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 HSP90B2PQ58FF3 399 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 EIF1ADQ8N9N8 165 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 HAUS1Q96CS2 278 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 CCDC114Q96M63 670 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 TRIM17Q9Y577 477 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 CD48P09326 243 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 AARSP49588 968 aaKnown RBP eCLIP23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 BCAT1P54687 386 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 KRT17Q04695 432 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 DSTYKQ6XUX3 929 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 HASPINQ8TF76 798 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 HSPH1Q92598 858 aa23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 KHSRPQ92945 711 aaKnown RBP eCLIP23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 DDX43Q9NXZ2 648 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-203ENST00000339162 SETSIPP0DME0 302 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 CETN2P41208 172 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 CDKN2BP42772 138 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 RAB27AP51159 221 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 SLC6A3Q01959 620 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 UPP1Q16831 310 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 HADHQ16836 314 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 TRAF7Q6Q0C0 670 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 FUKQ8N0W3 1084 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 FBXO25Q8TCJ0 367 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 PKNOX2Q96KN3 472 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 PEBP4Q96S96 227 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 TRAIPQ9BWF2 469 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 ZDHHC18Q9NUE0 388 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 DDX56Q9NY93 547 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 GRHL1Q9NZI5 618 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 USP18Q9UMW8 372 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 hCG_1818297A0A087WSY0 165 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 PTPN1P18031 435 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 TFDP3Q5H9I0 405 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 MDH1BQ5I0G3 518 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 ZDHHC24Q6UX98 284 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 POLNQ7Z5Q5 900 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 RTN4RL1Q86UN2 441 aaPredicted RBP23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.55■■□□□ 1.364e-7■■■■■ 58.1
PDLIM2-203ENST00000339162 ZIM3Q96PE6 472 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 TSEN34Q9BSV6 310 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 ASNSD1Q9NWL6 643 aa23.55■■□□□ 1.36
PDLIM2-203ENST00000339162 C3orf70A6NLC5 250 aaPredicted RBP23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 GABRDO14764 452 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 BEST1O76090 585 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 RABGGTBP53611 331 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 DYNLT1P63172 113 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 CCDC14Q49A88 953 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 TIGD5Q53EQ6 642 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 PRUNE1Q86TP1 453 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 PIK3R5Q8WYR1 880 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 CNPY3Q9BT09 278 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 FAN1Q9Y2M0 1017 aa23.54■■□□□ 1.36
PDLIM2-203ENST00000339162 B3GAT3O94766 335 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 KRT7P08729 469 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 HSPA9P38646 679 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 ECHDC2Q86YB7 292 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 STK32AQ8WU08 396 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 NDRG1Q92597 394 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 RUNDC3BQ96NL0 473 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 FMO2Q99518 471 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 VPS18Q9P253 973 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 SAE1Q9UBE0 346 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 F8W810 466 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 HSF2BPO75031 334 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 TJP3O95049 919 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 TRUB2O95900 331 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 VPS41P49754 854 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 CCNG2Q16589 344 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 PAQR9Q6ZVX9 377 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 MREGQ8N565 214 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 NGRNQ9NPE2 291 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 CRTAC1Q9NQ79 661 aa23.53■■□□□ 1.36
PDLIM2-203ENST00000339162 TFE3P19532 575 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 BRCC3P46736 316 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 DHX9Q08211 1270 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 CFAP58Q5T655 872 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 SCYL2Q6P3W7 929 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 PIGZQ86VD9 579 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 SLC43A3Q8NBI5 491 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 PGBD4Q96DM1 585 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 HNRNPABQ99729 332 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms