RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 HIST1H2ADP20671 130 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 TAF6P49848 677 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 DSG1Q02413 1049 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 PTK6Q13882 451 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 VEPH1Q14D04 833 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 CCDC33Q8N5R6 958 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 FAM172AQ8WUF8 416 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 ZNF606Q8WXB4 792 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 HIST1H2AHQ96KK5 128 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 HIST1H2AJQ99878 128 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 H2AFJQ9BTM1 129 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 CAAP1Q9H8G2 361 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 COG4Q9H9E3 785 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 PCDH9Q9HC56 1237 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 SLC38A7Q9NVC3 462 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 SHOC2Q9UQ13 582 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 DTNAQ9Y4J8 743 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 NPTXRO95502 500 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 LSM8O95777 96 aaKnown RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 SHMT1P34896 483 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 COL9A3Q14050 684 aaPredicted RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 OTOP1Q7RTM1 612 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 LINC00523Q86TU6 105 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 ZNF555Q8NEP9 628 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 PCDHA3Q9Y5H8 950 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 TRPC5OSA6NMA1 111 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 ZSCAN9O15535 394 aaPredicted RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 THRAP10827 490 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 CLCN3P51790 818 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 VCPP55072 806 aaKnown RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 AMHR2Q16671 573 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 IL31Q6EBC2 164 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 STYK1Q6J9G0 422 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 NOTUMQ6P988 496 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 WDR59Q6PJI9 974 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 DCLK3Q9C098 648 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 PXDNQ92626 1479 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 AASDHQ4L235 1098 aaPredicted RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 C3orf67Q6ZVT6 689 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 AGBL3Q8NEM8 1001 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 DTNBP1Q96EV8 351 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 CNDP1Q96KN2 507 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 EFCAB1Q9HAE3 211 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 UBQLN1Q9UMX0 589 aaKnown RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 DNAJC16Q9Y2G8 782 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 TM9SF1O15321 606 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 SKAP2O75563 359 aaPredicted RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 ANXA9O76027 345 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 ATP6V1G2O95670 118 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 ACO1P21399 889 aaKnown RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 BGNP21810 368 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 PNPLA4P41247 253 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 SERPINB10P48595 397 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 CYLC2Q14093 348 aaPredicted RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 MPZL3Q6UWV2 235 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 ARHGEF19Q8IW93 802 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 SYTL5Q8TDW5 730 aaPredicted RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 TMEM120AQ9BXJ8 343 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 TNPO2O14787 897 aaKnown RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 SUPT7LO94864 414 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 APOA1P02647 267 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 CDH2P19022 906 aaPredicted RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 GMPSP49915 693 aaPredicted RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 LAMC2Q13753 1193 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 MFN1Q8IWA4 741 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 RXFP2Q8WXD0 754 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 INPP5DQ92835 1189 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 LZTS1Q9Y250 596 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 SUPT3HB4E1H0 165 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 TIMM44O43615 452 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 RPS6KA5O75582 802 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 GYS1P13807 737 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 PTPN7P35236 360 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 SOX10P56693 466 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 LRRC8BQ6P9F7 803 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 VGLL2Q8N8G2 317 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 GLIS3Q8NEA6 775 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 ZKSCAN4Q969J2 545 aaPredicted RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 TEX12Q9BXU0 123 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 WDCPQ9H6R7 721 aa14.25□□□□□ -0.13
RTN4-202ENST00000337526 GPBP1L1Q9HC44 474 aaPredicted RBP14.25□□□□□ -0.13
RTN4-202ENST00000337526 TADA2AO75478 443 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 KRT16P08779 473 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 IL1R1P14778 569 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 KCNK10P57789 538 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 PTPN11Q06124 597 aaPredicted RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 MFSD14CQ5VZR4 134 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 RRM2BQ7LG56 351 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 EIF1ADQ8N9N8 165 aaKnown RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 SPATA17Q96L03 361 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 MTMR9Q96QG7 549 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 KCTD10Q9H3F6 313 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 LRRC40Q9H9A6 602 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 CD274Q9NZQ7 290 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 ZNF229Q9UJW7 825 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms