RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TMEM114B3SHH9 223 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 ANXA9O76027 345 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 PSMG1O95456 288 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 MSL3P1P0C860 447 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 PIK3CGP48736 1102 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 LIN54Q6MZP7 749 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 EXOC3L1Q86VI1 746 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 LRRC17Q8N6Y2 441 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 REXO4Q9GZR2 422 aaKnown RBP5.72□□□□□ -1.49
PTPRB-202ENST00000334414 ACADLP28330 430 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 USP39Q53GS9 565 aaKnown RBP5.72□□□□□ -1.49
PTPRB-202ENST00000334414 PDPK2PQ6A1A2 396 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 CCDC81Q6ZN84 652 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 DHDDSQ86SQ9 333 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 KIF2BQ8N4N8 673 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 TC2NQ8N9U0 490 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 REPS1Q96D71 796 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 KDM6AO15550 1401 aaPredicted RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 PIPSLA2A3N6 862 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 AXIN1O15169 862 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 NCK2O43639 380 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 CYP2E1P05181 493 aaPredicted RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 SLC2A3P11169 496 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 TPI1P60174 286 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 DLGAP5Q15398 846 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 RNF43Q68DV7 783 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 SLC26A11Q86WA9 606 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 DHFR2Q86XF0 187 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 C8orf59Q8N0T1 100 aaPredicted RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 MS4A14Q96JA4 679 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 SUGCTQ9HAC7 445 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 UBP1Q9NZI7 540 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 CD274Q9NZQ7 290 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 SNX9Q9Y5X1 595 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 C1orf232A0A0U1RR37 186 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 CD2BP2O95400 341 aaKnown RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 P4HBP07237 508 aaKnown RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 MYL12AP19105 171 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 TGM2P21980 687 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 RPL26P61254 145 aaKnown RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 ATP6AP1LQ52LC2 224 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 SPOUT1Q5T280 376 aaKnown RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 MYLPFQ96A32 169 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 HES6Q96HZ4 224 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 ZCCHC17Q9NP64 241 aaKnown RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 AK5Q9Y6K8 562 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 SORBS3O60504 671 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 SKAP2O75563 359 aaPredicted RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 COILP38432 576 aaPredicted RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 SPIDRQ14159 915 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 NDUFAF6Q330K2 333 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 ZCCHC8Q6NZY4 707 aaKnown RBP5.71□□□□□ -1.49
PTPRB-202ENST00000334414 AAGABQ6PD74 315 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 UBE2Q1Q7Z7E8 422 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 TSPAN14Q8NG11 270 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 HEMGNQ9BXL5 484 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 MFHAS1Q9Y4C4 1052 aa5.71□□□□□ -1.49
PTPRB-202ENST00000334414 CDK16Q00536 496 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 C5orf22Q49AR2 442 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 TMEM26Q6ZUK4 368 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 FUKQ8N0W3 1084 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 TCAIMQ8N3R3 496 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ACTRT2Q8TDY3 377 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 DCUN1D1Q96GG9 259 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 C11orf70Q9BRQ4 267 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SLC25A23Q9BV35 468 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF804BA4D1E1 1349 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CLUHO75153 1309 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ERVV-1B6SEH8 477 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 FAM20BO75063 409 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 BAIAP3O94812 1187 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 WEE2P0C1S8 567 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 BMP3P12645 472 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 TSHRP16473 764 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ATF6P18850 670 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CD58P19256 250 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 MB21D2Q8IYB1 491 aaPredicted RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SH2D3CQ8N5H7 860 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 JARID2Q92833 1246 aaPredicted RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ANKHQ9HCJ1 492 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 NFKBIL1Q9UBC1 381 aaPredicted RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF221Q9UK13 617 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 GTF3C4Q9UKN8 822 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SPATA2Q9UM82 520 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 METTL21EPA6NDL7 271 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 EEF2KO00418 725 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 PLK4O00444 970 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 TCF4P15884 667 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 RAG1P15918 1043 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SLC29A2Q14542 456 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 LRRC41Q15345 812 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF618Q5T7W0 954 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF589Q86UQ0 364 aaPredicted RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ARHGEF19Q8IW93 802 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CATSPERBQ9H7T0 1116 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 MKLN1Q9UL63 735 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 L1RE1Q9UN81 338 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 BAIAP2Q9UQB8 552 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SLIT1O75093 1534 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 DYNC1LI2O43237 492 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms