RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CTPS2Q9NRF8 586 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 GALNT8Q9NY28 637 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 COG5Q9UP83 839 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 FAM172BPA6NC97 362 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP9AO75110 1047 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTPN12Q05209 780 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARID5BQ14865 1188 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 LPCAT2Q7L5N7 544 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 CAND1Q86VP6 1230 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 AMER2Q8N7J2 671 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 REPS1Q96D71 796 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCDC74BQ96LY2 380 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 PBDC1Q9BVG4 233 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 UNKLQ9H9P5 680 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRPV5Q9NQA5 729 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MTF2Q9Y483 593 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 NPHP4O75161 1426 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 NPATQ14207 1427 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 F6X3S4 739 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM107AO95990 144 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP5F1P24539 256 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ITGA3P26006 1051 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 RARSP54136 660 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP12AP54707 1039 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 RIPK4P57078 832 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMC3Q7Z5M5 1100 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 KBTBD8Q8NFY9 601 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 STK32BQ9NY57 414 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 CDH7Q9ULB5 785 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 NSD2O96028 1365 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 HUS1O60921 280 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAGEA1P43355 309 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 BST2Q10589 180 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MTX1Q13505 466 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 RPS6KA1Q15418 735 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 TSNQ15631 228 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 AP5B1Q2VPB7 878 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM122CQ6P4D5 195 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 CYP2U1Q7Z449 544 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 CFAP206Q8IYR0 622 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZFPM2Q8WW38 1151 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 RACGAP1Q9H0H5 632 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MBIPQ9NS73 344 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 L3MBTL1Q9Y468 752 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 RPAP1Q9BWH6 1393 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 EFCAB7A8K855 629 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 IRAK2O43187 625 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 S100GP29377 79 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 SYKP43405 635 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 LIN9Q5TKA1 542 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 LRRC8DQ7L1W4 858 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MCATQ8IVS2 390 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF556Q9HAH1 456 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAPK8IP1Q9UQF2 711 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM32AQ9Y421 112 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 CLASP1Q7Z460 1538 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTGES3LE9PB15 166 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 PIGRP01833 764 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZDHHC11BP0C7U3 371 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 FGFR3P22607 806 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAD23AP54725 363 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 GOLM1Q8NBJ4 401 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 RNF34Q969K3 372 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 PGBD1Q96JS3 809 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MIPEPQ99797 713 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MROH7-TTC4A0A0A0MT08 1334 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 A0A087WXM4 84 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 TTC34A8MYJ7 566 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 HSBP1L1C9JCN9 74 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 KLHL2O95198 593 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 COPS2P61201 443 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 IQCHQ86VS3 1027 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 RADILQ96JH8 1075 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 METTL22Q9BUU2 404 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCDC106Q9BWC9 280 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 USE1Q9NZ43 259 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAN1B1Q9UKM7 699 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ACEP12821 1306 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 H0Y858 1186 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 TO15178 435 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAPRE1Q15691 268 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 CERCAMQ5T4B2 595 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ANO7Q6IWH7 933 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 ULK3Q6PHR2 472 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR5T2Q8NGG2 359 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 MKL1Q969V6 931 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 DCLK3Q9C098 648 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 KLHL4Q9C0H6 718 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 SP140LQ9H930 580 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 SERHLQ9NQF3 203 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLC12A6Q9UHW9 1150 aa6.27□□□□□ -1.41
CDC42BPA-201ENST00000334218 PDGFRAP16234 1089 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 YWHAGP61981 247 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RPS8P62241 208 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF45Q02386 682 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RRS1Q15050 365 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PAPD5Q8NDF8 572 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZFAND2BQ8WV99 257 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRNT1Q96Q11 434 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms