RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ACAP3Q96P50 834 aa19.84■□□□□ 0.77
RFTN1-201ENST00000334133 WDR83Q9BRX9 315 aaKnown RBP19.84■□□□□ 0.77
RFTN1-201ENST00000334133 B3GNT5Q9BYG0 378 aa19.84■□□□□ 0.77
RFTN1-201ENST00000334133 TRABDQ9H4I3 376 aa19.84■□□□□ 0.77
RFTN1-201ENST00000334133 NGRNQ9NPE2 291 aaKnown RBP19.84■□□□□ 0.77
RFTN1-201ENST00000334133 KLC4Q9NSK0 619 aa19.84■□□□□ 0.77
RFTN1-201ENST00000334133 SETD4Q9NVD3 440 aa19.84■□□□□ 0.77
RFTN1-201ENST00000334133 SNX9Q9Y5X1 595 aa19.84■□□□□ 0.77
RFTN1-201ENST00000334133 TSPAN1O60635 241 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 TCEA3O75764 348 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 TRUB2O95900 331 aaKnown RBP19.83■□□□□ 0.77
RFTN1-201ENST00000334133 DNAJC3Q13217 504 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 MTHFD1LQ6UB35 978 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 BBS12Q6ZW61 710 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 POLNQ7Z5Q5 900 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 TRABD2AQ86V40 505 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 SCUBE3Q8IX30 993 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 CCHCR1Q8TD31 782 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 C16orf70Q9BSU1 422 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 MAGEB5Q9BZ81 275 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 MIS12Q9H081 205 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 ACTR5Q9H9F9 607 aaPredicted RBP19.83■□□□□ 0.77
RFTN1-201ENST00000334133 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.83■□□□□ 0.77
RFTN1-201ENST00000334133 USP15Q9Y4E8 981 aaPredicted RBP19.83■□□□□ 0.77
RFTN1-201ENST00000334133 CLUHO75153 1309 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 SBF1O95248 1867 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 RPA3P35244 121 aaPredicted RBP19.83■□□□□ 0.77
RFTN1-201ENST00000334133 LAMC2Q13753 1193 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 ZC3H12AQ5D1E8 599 aaKnown RBP19.83■□□□□ 0.77
RFTN1-201ENST00000334133 ZNF484Q5JVG2 852 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 FAXCQ5TGI0 409 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 CGB2Q6NT52 195 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 PYROXD1Q8WU10 500 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 MRPL45Q9BRJ2 306 aaKnown RBP19.83■□□□□ 0.77
RFTN1-201ENST00000334133 KDM4CQ9H3R0 1056 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 SLCO1B3Q9NPD5 702 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 PNMA3Q9UL41 463 aa19.83■□□□□ 0.77
RFTN1-201ENST00000334133 SCN1AP35498 2009 aa19.83■□□□□ 0.76
RFTN1-201ENST00000334133 PPP1R26Q5T8A7 1209 aaPredicted RBP19.83■□□□□ 0.76
RFTN1-201ENST00000334133 SLC10A4Q96EP9 437 aa19.83■□□□□ 0.76
RFTN1-201ENST00000334133 CDHR5Q9HBB8 845 aa19.83■□□□□ 0.76
RFTN1-201ENST00000334133 SNTG2Q9NY99 539 aa19.83■□□□□ 0.76
RFTN1-201ENST00000334133 GRID1Q9ULK0 1009 aa19.83■□□□□ 0.76
RFTN1-201ENST00000334133 HEY1Q9Y5J3 304 aa19.83■□□□□ 0.76
RFTN1-201ENST00000334133 ALOX15BO15296 676 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 AVILO75366 819 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 NPTXRO95502 500 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 ZNF268Q14587 947 aaPredicted RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 GOLGA7BQ2TAP0 167 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 ARHGEF18Q6ZSZ5 1173 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 C3orf62Q6ZUJ4 267 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 TBC1D1Q86TI0 1168 aaPredicted RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 RELL1Q8IUW5 271 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 FUKQ8N0W3 1084 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 C7orf31Q8N865 590 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 FBXO36Q8NEA4 188 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 GPRC5AQ8NFJ5 357 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 C18orf25Q96B23 403 aaPredicted RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 RMDN2Q96LZ7 410 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 ZMAT2Q96NC0 199 aaKnown RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 CHMP2BQ9UQN3 213 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 WDR91A4D1P6 747 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 FAM47DPA6NHR8 397 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 RASSF9O75901 435 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 EPHX2P34913 555 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 ITIH4Q14624 930 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 LACTB2Q53H82 288 aaPredicted RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 PMF1Q6P1K2 205 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 DARS2Q6PI48 645 aaKnown RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 MCRS1Q96EZ8 462 aa19.82■□□□□ 0.76
RFTN1-201ENST00000334133 MAK16Q9BXY0 300 aaKnown RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 XPO7Q9UIA9 1087 aaKnown RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 BARX2Q9UMQ3 279 aaPredicted RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 FARP1Q9Y4F1 1045 aaPredicted RBP19.82■□□□□ 0.76
RFTN1-201ENST00000334133 YBX3P16989 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
RFTN1-201ENST00000334133 TFE3P19532 575 aaPredicted RBP19.81■□□□□ 0.76
RFTN1-201ENST00000334133 CA4P22748 312 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 TNFAIP2Q03169 654 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 SPATA21Q7Z572 469 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 TUBGCP4Q9UGJ1 667 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 PDHXO00330 501 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 PFKMP08237 780 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 VDRP11473 427 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 TAC1P20366 129 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 PTPN7P35236 360 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 SNAPC2Q13487 334 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 GRIK4Q16099 956 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 MARCH8Q5T0T0 291 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 CYB5D1Q6P9G0 228 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 IGDCC3Q8IVU1 814 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 PPIL6Q8IXY8 311 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 EIF2AQ9BY44 585 aaKnown RBP19.81■□□□□ 0.76
RFTN1-201ENST00000334133 SHOC2Q9UQ13 582 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 NME7Q9Y5B8 376 aa19.81■□□□□ 0.76
RFTN1-201ENST00000334133 H7C0C1 242 aa19.8■□□□□ 0.76
RFTN1-201ENST00000334133 GPD1P21695 349 aa19.8■□□□□ 0.76
RFTN1-201ENST00000334133 ATP5OP48047 213 aa19.8■□□□□ 0.76
RFTN1-201ENST00000334133 ATXN1P54253 815 aaKnown RBP19.8■□□□□ 0.76
RFTN1-201ENST00000334133 SLC1A5Q15758 541 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms