RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 TPM3P06753 285 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 VDRP11473 427 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 GPR15P49685 360 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 STILQ15468 1287 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 ARHGAP44Q17R89 818 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 GJD3Q8N144 294 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 NEK11Q8NG66 645 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 TRMT2BQ96GJ1 504 aaKnown RBP21.73■■□□□ 1.07
MRPL40-201ENST00000333130 CDH7Q9ULB5 785 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 C2CD4DB7Z1M9 353 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 LOC730098B7Z3J9 87 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 RTN3O95197 1032 aaPredicted RBP21.72■■□□□ 1.07
MRPL40-201ENST00000333130 GABRR2P28476 465 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 PTPN21Q16825 1174 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 PPP1R26Q5T8A7 1209 aaPredicted RBP21.72■■□□□ 1.07
MRPL40-201ENST00000333130 SDHAF4Q5VUM1 108 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 ARHGAP17Q68EM7 881 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 TMC8Q8IU68 726 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 ZDHHC14Q8IZN3 488 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 HS6ST3Q8IZP7 471 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 SLITRK6Q9H5Y7 841 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 GDE1Q9NZC3 331 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 ZMYM5Q9UJ78 669 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 OBSL1O75147 1896 aa21.72■■□□□ 1.07
MRPL40-201ENST00000333130 TTC28Q96AY4 2481 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 MYO16Q9Y6X6 1858 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 ITIH6Q6UXX5 1313 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 A0A0C4DFX4 3053 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 NPR3P17342 541 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 USP8P40818 1118 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 JAM2P57087 298 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 POLR2FP61218 127 aaKnown RBP21.71■■□□□ 1.07
MRPL40-201ENST00000333130 RAPGEF1Q13905 1077 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 SLC5A9Q2M3M2 681 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 FIGNQ5HY92 759 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 PRSS36Q5K4E3 855 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 NUP93Q8N1F7 819 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 ITFG1Q8TB96 612 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 ING5Q8WYH8 240 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 FGF13Q92913 245 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 STK33Q9BYT3 514 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 TTYH3Q9C0H2 523 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 ATXN3LQ9H3M9 355 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 EPS15L1Q9UBC2 864 aa21.71■■□□□ 1.07
MRPL40-201ENST00000333130 A0A1W2PRU2 124 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 C19orf67A6NJJ6 358 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 F8VZ95 297 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 RNF225M0QZC1 329 aaPredicted RBP21.7■■□□□ 1.06
MRPL40-201ENST00000333130 BCAT1P54687 386 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 MAP3K7CLP57077 242 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 DRAP1Q14919 205 aaPredicted RBP21.7■■□□□ 1.06
MRPL40-201ENST00000333130 PAQR9Q6ZVX9 377 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 MTSS1LQ765P7 747 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 NPAS3Q8IXF0 933 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 MYRFLQ96LU7 910 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 SLITRK1Q96PX8 696 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 MYADMQ96S97 322 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 DUSP16Q9BY84 665 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 CSNK1G1Q9HCP0 422 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 ZNF334Q9HCZ1 680 aaPredicted RBP21.7■■□□□ 1.06
MRPL40-201ENST00000333130 PNPLA8Q9NP80 782 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 VCANP13611 3396 aa21.7■■□□□ 1.06
MRPL40-201ENST00000333130 MED7O43513 233 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 LAMP2P13473 410 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 HMGA1P17096 107 aaKnown RBP21.69■■□□□ 1.06
MRPL40-201ENST00000333130 CEBPBP17676 345 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 DDX6P26196 483 aaKnown RBP eCLIP21.69■■□□□ 1.061e-7■□□□□ 9.9
MRPL40-201ENST00000333130 MTMR3Q13615 1198 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 GOLGA7BQ2TAP0 167 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 CLEC20AQ6ZU45 233 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 FAM71AQ8IYT1 594 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 MRPS31Q92665 395 aaKnown RBP21.69■■□□□ 1.06
MRPL40-201ENST00000333130 TCEAL4Q96EI5 215 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 NECAB3Q96P71 396 aaPredicted RBP21.69■■□□□ 1.06
MRPL40-201ENST00000333130 LRRC3Q9BY71 257 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 FBXO44Q9H4M3 255 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 COMMD8Q9NX08 183 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 TSPAN16Q9UKR8 245 aa21.69■■□□□ 1.06
MRPL40-201ENST00000333130 NUP210Q8TEM1 1887 aaPredicted RBP21.68■■□□□ 1.06
MRPL40-201ENST00000333130 MYO10Q9HD67 2058 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 FOXN3O00409 490 aaPredicted RBP21.68■■□□□ 1.06
MRPL40-201ENST00000333130 PPP3CCP48454 512 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 SLC5A3P53794 718 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 CACNA2D1P54289 1103 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 IFRD2Q12894 506 aaPredicted RBP21.68■■□□□ 1.06
MRPL40-201ENST00000333130 ANKRD52Q8NB46 1076 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 SHKBP1Q8TBC3 707 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 NXPE3Q969Y0 559 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 KCNK16Q96T55 309 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 SMOQ99835 787 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 TTLL2Q9BWV7 592 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 NLRC4Q9NPP4 1024 aa21.68■■□□□ 1.06
MRPL40-201ENST00000333130 SETSIPP0DME0 302 aa21.67■■□□□ 1.06
MRPL40-201ENST00000333130 YWHAQP27348 245 aa21.67■■□□□ 1.06
MRPL40-201ENST00000333130 GNA15P30679 374 aa21.67■■□□□ 1.06
MRPL40-201ENST00000333130 CCR2P41597 374 aa21.67■■□□□ 1.06
MRPL40-201ENST00000333130 BPIFB4P59827 614 aa21.67■■□□□ 1.06
MRPL40-201ENST00000333130 PTK2Q05397 1052 aa21.67■■□□□ 1.06
MRPL40-201ENST00000333130 BST2Q10589 180 aaKnown RBP21.67■■□□□ 1.06
MRPL40-201ENST00000333130 TEAD2Q15562 447 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms