RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 RNF44Q7L0R7 432 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 GLMNQ92990 594 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 MTMR4Q9NYA4 1195 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 SH3BP4Q9P0V3 963 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 SPACA6W5XKT8 324 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 MGAT4DA6NG13 374 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 MYMKA6NI61 221 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 ENO4A6NNW6 628 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 DCDC2CA8MYV0 355 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 PYGMP11217 842 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 CYP2C19P33261 490 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 CYP4X1Q8N118 509 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 SPATA4Q8NEY3 305 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 MDM1Q8TC05 714 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 IL1RAPL1Q9NZN1 696 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 VTI1BQ9UEU0 232 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 TRADDQ15628 312 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 GSTA3Q16772 222 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 IRAK1BP1Q5VVH5 260 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 TYW3Q6IPR3 259 aaKnown RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 KLHL24Q6TFL4 600 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 MRPL39Q9NYK5 338 aaKnown RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 MYH10P35580 1976 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 SLC12A8A0AV02 714 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 HLA-DQA2P01906 255 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 FMR1NBQ8N0W7 255 aaPredicted RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 POMGNT2Q8NAT1 580 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 DPF2Q92785 391 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 PDGFDQ9GZP0 370 aaPredicted RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 TMEM39AQ9NV64 488 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 PRKAB1Q9Y478 270 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 DAGLAQ9Y4D2 1042 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 URODP06132 367 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 FNDC3BQ53EP0 1204 aaKnown RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 ZNF786Q8N393 782 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 MRPS31Q92665 395 aaKnown RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 ACOX2Q99424 681 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 SPRTNQ9H040 489 aaPredicted RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 HDHD2Q9H0R4 259 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 VCLP18206 1134 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 ATP6V1B2P21281 511 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 LY6KQ17RY6 165 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 TRIM71Q2Q1W2 868 aaKnown RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 ICE2Q659A1 982 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 MMGT1Q8N4V1 131 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 PHF21BQ96EK2 531 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 FAR2Q96K12 515 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 STK33Q9BYT3 514 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 GID8Q9NWU2 228 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLN8-201ENST00000331222 PSMC3IPQ9P2W1 217 aaPredicted RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 CDH2P19022 906 aaPredicted RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 GRK3P35626 688 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 CCNG1P51959 295 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 PDK1Q15118 436 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 SYTL1Q8IYJ3 562 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 NBPF15Q8N660 670 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 WDR24Q96S15 920 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 DYRK1BQ9Y463 629 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 M0R3G1 203 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 PLA2G6O60733 806 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 DGAT1O75907 488 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 USP1O94782 785 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 IL18RAPO95256 599 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 NR3C2P08235 984 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 VSNL1P62760 191 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 SRSF11Q05519 484 aaKnown RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 TPGS1Q6ZTW0 290 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ADAM32Q8TC27 787 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 PRPF18Q99633 342 aaKnown RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 CCT7Q99832 543 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 SENP6Q9GZR1 1112 aaPredicted RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 MIEF1Q9NQG6 463 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ZMYM5Q9UJ78 669 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 MAGI2Q86UL8 1455 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 RGS2P41220 211 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 UGT3A1Q6NUS8 523 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 C11orf88Q6PI97 169 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 MACC1Q6ZN28 852 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 MICU2Q8IYU8 434 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ADGRF2Q8IZF7 708 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 NSUN4Q96CB9 384 aaKnown RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 EPN3Q9H201 632 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 STARD7Q9NQZ5 370 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 POLR1DQ9Y2S0 133 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 FAM187AA6NFU0 413 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 CCDC85CA6NKD9 419 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 MSH4O15457 936 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 UMPSP11172 480 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 AP3M2P53677 418 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 FMR1Q06787 632 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLN8-201ENST00000331222 DHX34Q14147 1143 aaKnown RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 MTSS1LQ765P7 747 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 SETD3Q86TU7 594 aaPredicted RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 CALML6Q8TD86 181 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 KLHL1Q9NR64 748 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 LCMT1Q9UIC8 334 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 SYNMO15061 1565 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 LRRIQ3A6PVS8 624 aaPredicted RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 EXTL3O43909 919 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms