RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CCDC50Q8IVM0 306 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 EXD1Q8NHP7 514 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 TNIP3Q96KP6 325 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 RGS18Q9NS28 235 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 KLHL11Q9NVR0 708 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 INPP5FQ9Y2H2 1132 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 ACAT1P24752 427 aaKnown RBP21.31■■□□□ 1
RIPPLY3-201ENST00000329553 HSPA9P38646 679 aaKnown RBP21.31■■□□□ 1
RIPPLY3-201ENST00000329553 CORO7P57737 925 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 GNGT1P63211 74 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 CYP1B1Q16678 543 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 CCDC142Q17RM4 750 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 EMC10Q5UCC4 262 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 LRRC38Q5VT99 294 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 TTC27Q6P3X3 843 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 B3GALNT2Q8NCR0 500 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 SLC2A14Q8TDB8 520 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 RNF25Q96BH1 459 aaPredicted RBP21.31■■□□□ 1
RIPPLY3-201ENST00000329553 HEMGNQ9BXL5 484 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 MIS12Q9H081 205 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 UBN1Q9NPG3 1134 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 ECHS1P30084 290 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 CHRNA3P32297 505 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 DR1Q01658 176 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 MTFR1Q15390 333 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 STK32AQ8WU08 396 aa21.31■■□□□ 1
RIPPLY3-201ENST00000329553 TIMM13Q9Y5L4 95 aaPredicted RBP21.31■■□□□ 1
RIPPLY3-201ENST00000329553 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.31■■□□□ 1
RIPPLY3-201ENST00000329553 C9IYK1 514 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 LRCH4O75427 683 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 RALAP11233 206 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 TKTP29401 623 aaKnown RBP21.3■■□□□ 1
RIPPLY3-201ENST00000329553 BST2Q10589 180 aaKnown RBP21.3■■□□□ 1
RIPPLY3-201ENST00000329553 CUL1Q13616 776 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 KIAA0319Q5VV43 1072 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 DSTYKQ6XUX3 929 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 DDX42Q86XP3 938 aaKnown RBP eCLIP21.3■■□□□ 1
RIPPLY3-201ENST00000329553 SCUBE3Q8IX30 993 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 TRIM51Q9BSJ1 452 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 DNAI2Q9GZS0 605 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.3■■□□□ 1
RIPPLY3-201ENST00000329553 PTPN22Q9Y2R2 807 aa21.3■■□□□ 1
RIPPLY3-201ENST00000329553 PI4K2BG5E9Z4 385 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 DNM1LO00429 736 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 PTPN1P18031 435 aaKnown RBP21.29■■□□□ 1
RIPPLY3-201ENST00000329553 BCAT1P54687 386 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 TRNP1Q6NT89 227 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 RCOR2Q8IZ40 523 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 LINC01599Q8WXQ3 324 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 DEFB118Q96PH6 123 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 B3GNT5Q9BYG0 378 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 OSBPL8Q9BZF1 889 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 PAK6Q9NQU5 681 aaPredicted RBP21.29■■□□□ 1
RIPPLY3-201ENST00000329553 DDX43Q9NXZ2 648 aaKnown RBP21.29■■□□□ 1
RIPPLY3-201ENST00000329553 PCYOX1Q9UHG3 505 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 TDRD15B5MCY1 1934 aaKnown RBP21.29■■□□□ 1
RIPPLY3-201ENST00000329553 PAPSS1O43252 624 aaPredicted RBP21.29■■□□□ 1
RIPPLY3-201ENST00000329553 GRAP2O75791 330 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 PTGIRP43119 386 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 GRIK3Q13003 919 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 DHX34Q14147 1143 aaKnown RBP21.29■■□□□ 1
RIPPLY3-201ENST00000329553 TAF5Q15542 800 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 TIGD5Q53EQ6 642 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 ZFYVE27Q5T4F4 411 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 CCDC137Q6PK04 289 aaKnown RBP21.29■■□□□ 1
RIPPLY3-201ENST00000329553 OLFML1Q6UWY5 402 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 FUKQ8N0W3 1084 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 SH2D3CQ8N5H7 860 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 C1orf54Q8WWF1 131 aa21.29■■□□□ 1
RIPPLY3-201ENST00000329553 ACSF2Q96CM8 615 aaPredicted RBP21.29■■□□□ 1
RIPPLY3-201ENST00000329553 C2CD4BA6NLJ0 364 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 COILP38432 576 aaPredicted RBP21.28■■□□□ 1
RIPPLY3-201ENST00000329553 KCNJ1P48048 391 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 CDR1P51861 262 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 SLC25A11Q02978 314 aaKnown RBP21.28■■□□□ 1
RIPPLY3-201ENST00000329553 KLF1Q13351 362 aaPredicted RBP21.28■■□□□ 1
RIPPLY3-201ENST00000329553 KDM7AQ6ZMT4 941 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 SLC24A5Q71RS6 500 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 LRRC8DQ7L1W4 858 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 FAM126BQ8IXS8 530 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 SEC14L1Q92503 715 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 RAPGEF5Q92565 580 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 KHSRPQ92945 711 aaKnown RBP eCLIP21.28■■□□□ 1
RIPPLY3-201ENST00000329553 SLITRK1Q96PX8 696 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 HNRNPABQ99729 332 aaKnown RBP21.28■■□□□ 1
RIPPLY3-201ENST00000329553 LRRC19Q9H756 370 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 CLDN5O00501 218 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 DAPK3O43293 454 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 B3GAT3O94766 335 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 KRT1P04264 644 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 IL1R2P27930 398 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 FLT3P36888 993 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 MAGEA9P43362 315 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 ZNF143P52747 638 aaPredicted RBP21.28■■□□□ 1
RIPPLY3-201ENST00000329553 SLC6A3Q01959 620 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 TUSC3Q13454 348 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 PAN2Q504Q3 1202 aaKnown RBP21.28■■□□□ 1
RIPPLY3-201ENST00000329553 KCTD16Q68DU8 428 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 MFSD7Q6UXD7 560 aa21.28■■□□□ 1
RIPPLY3-201ENST00000329553 CD300LGQ6UXG3 332 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms