RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 STAT2P52630 851 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 PEX3P56589 373 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 BTKQ06187 659 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 ZNF252P-AS1Q0IIN9 211 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 TEX44Q53QW1 395 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 C2CD6Q53TS8 623 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 SLC39A4Q6P5W5 647 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 SPATA24Q86W54 205 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 RASSF3Q86WH2 238 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 C4orf19Q8IY42 314 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 JADE3Q92613 823 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 TTC17Q96AE7 1141 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 DGCR14Q96DF8 476 aaKnown RBP11.77□□□□□ -0.53
GINS3-202ENST00000328514 KLF6Q99612 283 aaPredicted RBP11.77□□□□□ -0.53
GINS3-202ENST00000328514 THTPAQ9BU02 230 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 ALG13Q9NP73 1137 aaKnown RBP11.77□□□□□ -0.53
GINS3-202ENST00000328514 ZNF180Q9UJW8 692 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 PLLPQ9Y342 182 aa11.77□□□□□ -0.53
GINS3-202ENST00000328514 MRPL11Q9Y3B7 192 aaKnown RBP11.77□□□□□ -0.53
GINS3-202ENST00000328514 C2orf71A6NGG8 1288 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 DDTLA6NHG4 134 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 C3orf70A6NLC5 250 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 SNNO75324 88 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 TMCC1O94876 653 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 HARSP12081 509 aaKnown RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 TCF4P15884 667 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 ITGB5P18084 799 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 VCLP18206 1134 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 YWHABP31946 246 aaKnown RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 CCNFP41002 786 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 GRIA2P42262 883 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 ZNF200P98182 395 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 TAP1Q03518 808 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 GAD2Q05329 585 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 WASHC5Q12768 1159 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 PIGHQ14442 188 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 DBN1Q16643 649 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 ZACNQ401N2 412 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 TMEM259Q4ZIN3 620 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 EFHC1Q5JVL4 640 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 SMYD5Q6GMV2 418 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 PGM2L1Q6PCE3 622 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 RAPH1Q70E73 1250 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 GPD1LQ8N335 351 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 NLRP4Q96MN2 994 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 SRPK1Q96SB4 655 aaKnown RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 TTC1Q99614 292 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 LBHD1Q9BQE6 289 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 KLHL4Q9C0H6 718 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 STN1Q9H668 368 aaKnown RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 PPARGC1AQ9UBK2 798 aaKnown RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 TCRBV9S1A1TA0A576 114 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 GOLGA8SH3BPF8 625 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 GOLGA8MH3BSY2 632 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 IFNB1P01574 187 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 C1QAP02745 245 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 CALB1P05937 261 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 INHBAP08476 426 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 CCDC166P0CW27 439 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 RPL22P35268 128 aaKnown RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 GJC1P36383 396 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 NPTX2P47972 431 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 CPA2P48052 419 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 RPL7AP62424 266 aaKnown RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 BST1Q10588 318 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 MSLNQ13421 630 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 BRDTQ58F21 947 aaPredicted RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 WDR44Q5JSH3 913 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 UGT2A3Q6UWM9 527 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 FAM196AQ6ZSG2 479 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 BBS12Q6ZW61 710 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 SH3BP5LQ7L8J4 393 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 PRPF39Q86UA1 669 aaKnown RBP11.76□□□□□ -0.53
GINS3-202ENST00000328514 NCAPG2Q86XI2 1143 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 POMGNT1Q8WZA1 660 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 CLPTM1LQ96KA5 538 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 KCNH7Q9NS40 1196 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 ANKEF1Q9NU02 776 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 KLHL11Q9NVR0 708 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 GALNT8Q9NY28 637 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 FAM198AQ9UFP1 575 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 IKBKGQ9Y6K9 419 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 ADAMTSL1Q8N6G6 1762 aa11.76□□□□□ -0.53
GINS3-202ENST00000328514 KLRG2A4D1S0 409 aaPredicted RBP11.75□□□□□ -0.53
GINS3-202ENST00000328514 SDR42E2A6NKP2 422 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 COPEO14579 308 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 BIRC5O15392 142 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 STRNO43815 780 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 PLA2G6O60733 806 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 TMEM63AO94886 807 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 BAG2O95816 211 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 ITGA2BP08514 1039 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 CFHP08603 1231 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 GNA15P30679 374 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 PTGER2P43116 358 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms