RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 NPHP4O75161 1426 aaPredicted RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 VPS4BO75351 444 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 PROP1O75360 226 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 ABLIM3O94929 683 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 KIF20AO95235 890 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 CHRM3P20309 590 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 GPD1P21695 349 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 CD6P30203 668 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 SOX10P56693 466 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 ZNF362Q5T0B9 420 aaPredicted RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 IFIT1BQ5T764 474 aaKnown RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 MEX3CQ5U5Q3 659 aaKnown RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 FAM160B1Q5W0V3 765 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 PPP1R32Q7Z5V6 425 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 USP37Q86T82 979 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 FAM177A1Q8N128 213 aaPredicted RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 HPS3Q969F9 1004 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 FKBP10Q96AY3 582 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 SLC35A4Q96G79 324 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 ASB6Q9NWX5 421 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 DDX56Q9NY93 547 aaKnown RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 PNMA8BQ9ULN7 279 aaPredicted RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 AGAP1Q9UPQ3 857 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 PCDHA1Q9Y5I3 950 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 ZNF831Q5JPB2 1677 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 CCDC144AA2RUR9 1427 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 USP24Q9UPU5 2620 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 PRSS29PA6NIE9 313 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 ADM5C9JUS6 153 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 TTLL1O95922 423 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 AHSGP02765 367 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 PDGFRBP09619 1106 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 GCLCP48506 637 aaPredicted RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 KCNJ5P48544 419 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 TTF1Q15361 905 aaPredicted RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 RBM20Q5T481 1227 aaKnown RBP2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 PPP1R3BQ86XI6 285 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 GRAMD1CQ8IYS0 662 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 ZNF384Q8TF68 577 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 SARAFQ96BY9 339 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 C1GALT1C1Q96EU7 318 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 CAMKK2Q96RR4 588 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 TIMP4Q99727 224 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 ACTRT3Q9BYD9 372 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 SMOC2Q9H3U7 446 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 CPNE5Q9HCH3 593 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 EHD3Q9NZN3 535 aa2.04□□□□□ -2.08
CCDC144A-201ENST00000328495 CLTCL1P53675 1640 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 ABCA6Q8N139 1617 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 WDR27A2RRH5 827 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 LINC00473A8K010 186 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 TAF4O00268 1085 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 NXPH3O95157 252 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 PIM1P11309 404 aaPredicted RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 WT1P19544 449 aaPredicted RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 NKX6-1P78426 367 aaPredicted RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 SATB1Q01826 763 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 EXOSC9Q06265 439 aaKnown RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 PLS1Q14651 629 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 PLAC9Q5JTB6 97 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 ATAT1Q5SQI0 421 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 TSTD2Q5T7W7 516 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 EMC10Q5UCC4 262 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 LAYNQ6UX15 382 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 FAM46DQ8NEK8 389 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 NTN5Q8WTR8 489 aaPredicted RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 ATRIPQ8WXE1 791 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 FAM136AQ96C01 138 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 MOGAT1Q96PD6 335 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 NELL2Q99435 816 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 NMRK2Q9NPI5 230 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 IL17RBQ9NRM6 502 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 ARPP21Q9UBL0 812 aaPredicted RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 HESX1Q9UBX0 185 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 ADGRA2Q96PE1 1338 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 PCLOQ9Y6V0 5065 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 COL11A2P13942 1736 aaPredicted RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 CUL9Q8IWT3 2517 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 PROB1E7EW31 1015 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 RHOP08100 348 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 ATXN1LP0C7T5 689 aaKnown RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 CAPN2P17655 700 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 HNRNPMP52272 730 aaKnown RBP eCLIP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 SOX8P57073 446 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 MCL1Q07820 350 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 AMOTQ4VCS5 1084 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 SFRP4Q6FHJ7 346 aaPredicted RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 CAMKK1Q8N5S9 505 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 PCSK9Q8NBP7 692 aaKnown RBP2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 HAPLN3Q96S86 360 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 ZNF180Q9UJW8 692 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 PLEKHM1Q9Y4G2 1056 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 WNT6Q9Y6F9 365 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 PLXNA3P51805 1871 aa2.03□□□□□ -2.08
CCDC144A-201ENST00000328495 C1QL1O75973 258 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 TOP3BO95985 862 aaKnown RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ZFXP17010 805 aaPredicted RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF37AP17032 561 aaPredicted RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 EPHB1P54762 984 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms