RNA–Protein interactions for RNA: ENST00000327331.2

CDCA8-201, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-201ENST00000327331 KCNK3O14649 394 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 UPP2O95045 317 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 COL6A1P12109 1028 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 ITGB8P26012 769 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 PBX3P40426 434 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 PNPLA4P41247 253 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 GJA8P48165 433 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 SLC8A3P57103 927 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 RPL7AP62424 266 aaKnown RBP12.22□□□□□ -0.45
CDCA8-201ENST00000327331 LLGL1Q15334 1064 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 IFI16Q16666 785 aaKnown RBP12.22□□□□□ -0.45
CDCA8-201ENST00000327331 KIAA0319Q5VV43 1072 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 GLB1LQ6UWU2 654 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 TRIM72Q6ZMU5 477 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 NT5DC3Q86UY8 548 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 ERICH1Q86X53 443 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 RHOT2Q8IXI1 618 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 ARMC5Q96C12 935 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 TMEM39AQ9NV64 488 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 GDAP2Q9NXN4 497 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 PCDHGC3Q9UN70 934 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 ALG6Q9Y672 507 aa12.22□□□□□ -0.45
CDCA8-201ENST00000327331 CLDN5O00501 218 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 MED7O43513 233 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 KIF4AO95239 1232 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 ERBB2P04626 1255 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 VDRP11473 427 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 COMTP21964 271 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 MMP8P22894 467 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 RNASELQ05823 741 aaKnown RBP12.21□□□□□ -0.45
CDCA8-201ENST00000327331 IFFO1Q0D2I5 559 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 ZNF211Q13398 564 aaPredicted RBP12.21□□□□□ -0.45
CDCA8-201ENST00000327331 MAMLD1Q13495 774 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 RPS6KA1Q15418 735 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 AADACL2Q6P093 401 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 TTC30AQ86WT1 665 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.45
CDCA8-201ENST00000327331 IQCKQ8N0W5 287 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 SYNCQ9H7C4 482 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 STXBP5LQ9Y2K9 1186 aa12.21□□□□□ -0.45
CDCA8-201ENST00000327331 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.21□□□□□ -0.46
CDCA8-201ENST00000327331 KLHL33A6NCF5 533 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 PFKMP08237 780 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 RPSAP08865 295 aaKnown RBP12.21□□□□□ -0.46
CDCA8-201ENST00000327331 TKTP29401 623 aaKnown RBP12.21□□□□□ -0.46
CDCA8-201ENST00000327331 OR1G1P47890 313 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 SPRED3Q2MJR0 410 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 ANKRD20A8PQ5CZ79 823 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 NOMO2Q5JPE7 1267 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 LIN9Q5TKA1 542 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 CD300LGQ6UXG3 332 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.463e-12■■■■■ 38.6
CDCA8-201ENST00000327331 ARMC2Q8NEN0 867 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 SLC2A14Q8TDB8 520 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 SEPT8Q92599 483 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 KRT35Q92764 455 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 ATP6V1G3Q96LB4 118 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 MCEEQ96PE7 176 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 C11orf49Q9H6J7 331 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 TBC1D13Q9NVG8 400 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 AMFRQ9UKV5 643 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 USTQ9Y2C2 406 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 ATP8B3O60423 1300 aa12.21□□□□□ -0.46
CDCA8-201ENST00000327331 SKAP2O75563 359 aaPredicted RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 SKIP12755 728 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 GJC1P36383 396 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 GPD2P43304 727 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 CTCFP49711 727 aaPredicted RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 TUSC3Q13454 348 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 CNGA2Q16280 664 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 C8orf74Q6P047 294 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 FAM117BQ6P1L5 589 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 SLFN11Q7Z7L1 901 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 MAB21L3Q8N8X9 362 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 ZNF483Q8TF39 744 aaPredicted RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 RSRC1Q96IZ7 334 aaKnown RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 PIWIL1Q96J94 861 aaKnown RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 RHOBTB2Q9BYZ6 727 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 PPANQ9NQ55 473 aaKnown RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 DDX43Q9NXZ2 648 aaKnown RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 PCDHB7Q9Y5E2 793 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 HMGB1P1B2RPK0 211 aaPredicted RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 GRAP2O75791 330 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 LSM8O95777 96 aaKnown RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 GCKP35557 465 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 FAM189BP81408 668 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
CDCA8-201ENST00000327331 MDH1BQ5I0G3 518 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 PMF1Q6P1K2 205 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 DNAJC24Q6P3W2 148 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 EMC1Q8N766 993 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 FTHL17Q9BXU8 183 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 LRFN2Q9ULH4 789 aa12.2□□□□□ -0.46
CDCA8-201ENST00000327331 NT5C1B-RDH14C9J2C7 533 aa12.19□□□□□ -0.46
CDCA8-201ENST00000327331 E5RJQ4 531 aa12.19□□□□□ -0.46
CDCA8-201ENST00000327331 SPOPO43791 374 aa12.19□□□□□ -0.46
CDCA8-201ENST00000327331 EOMESO95936 686 aa12.19□□□□□ -0.46
CDCA8-201ENST00000327331 SSR1P43307 286 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms