RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NAA35Q5VZE5 725 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 RSPO2Q6UXX9 243 aaPredicted RBP19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 FUKQ8N0W3 1084 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 MYCBPAPQ8TBZ2 947 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 ACTRT1Q8TDG2 376 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 RIN2Q8WYP3 895 aaPredicted RBP19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 B3GNT5Q9BYG0 378 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 CNOT8Q9UFF9 292 aaKnown RBP19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 CHD9Q3L8U1 2897 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 CCDC151A5D8V7 595 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 CLDN5O00501 218 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 TBC1D4O60343 1298 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 STILQ15468 1287 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 CCDC70Q6NSX1 233 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 FAM171BQ6P995 826 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 PAQR9Q6ZVX9 377 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 ANKS3Q6ZW76 656 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 TTC30AQ86WT1 665 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 PHF13Q86YI8 300 aaPredicted RBP19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 VPS52Q8N1B4 723 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 UBA3Q8TBC4 463 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 ZNF564Q8TBZ8 553 aaPredicted RBP19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 NUP85Q9BW27 656 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 ZCWPW1Q9H0M4 648 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 MTUS1Q9ULD2 1270 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 ALG6Q9Y672 507 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 PLXNA4Q9HCM2 1894 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 MIF4GDA9UHW6 222 aaKnown RBP19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 C2CD2LO14523 706 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 LSM8O95777 96 aaKnown RBP19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 RHOXF2BP0C7M4 288 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 MCM3P25205 808 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 BMP8BP34820 402 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 GLUD2P49448 558 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 PLCB3Q01970 1234 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 KRT17Q04695 432 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 C2orf54Q08AI8 447 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 KIAA1841Q6NSI8 718 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 WDR93Q6P2C0 686 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 MON1BQ7L1V2 547 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 WDTC1Q8N5D0 677 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 C1orf131Q8NDD1 294 aaKnown RBP19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 CPA5Q8WXQ8 436 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 PIK3R5Q8WYR1 880 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 MYLPFQ96A32 169 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 PCED1BQ96HM7 432 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 MS4A14Q96JA4 679 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 HNRNPABQ99729 332 aaKnown RBP19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 RHOXF2Q9BQY4 288 aa19.79■□□□□ 0.76
EXOSC3-201ENST00000327304 OR6C75A6NL08 312 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 H7C4K7 107 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 DNA2P51530 1060 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 DSG1Q02413 1049 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 PSMD5Q16401 504 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 PKDCCQ504Y2 493 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 RASGEF1CQ8N431 466 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 HNRNPLLQ8WVV9 542 aaKnown RBP19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 AUTS2Q8WXX7 1259 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 RUBCNQ92622 972 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 MED10Q9BTT4 135 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 PBX4Q9BYU1 374 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 ZNF518BQ9C0D4 1074 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 LHX5Q9H2C1 402 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 MTRRQ9UBK8 725 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 CYTH4Q9UIA0 394 aa19.78■□□□□ 0.76
EXOSC3-201ENST00000327304 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 DDX3YO15523 660 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 RPL17P18621 184 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 CDH5P33151 784 aaPredicted RBP19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 C1QBPQ07021 282 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 SLC39A12Q504Y0 691 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 TMCO3Q6UWJ1 677 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 FAM35AQ86V20 835 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 TMEM35BQ8NCS4 154 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 PNKPQ96T60 521 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 RHOBTB2Q9BYZ6 727 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 CARD9Q9H257 536 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 ALG13Q9NP73 1137 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 EHD2Q9NZN4 543 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 TTC7AQ9ULT0 858 aaPredicted RBP19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 RWDD3Q9Y3V2 267 aa19.77■□□□□ 0.76
EXOSC3-201ENST00000327304 ADAM12O43184 909 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 ATMINO43313 823 aaPredicted RBP19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 URODP06132 367 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 DNAJB2P25686 324 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 GPD2P43304 727 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 ARPP19P56211 112 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 TAP1Q03518 808 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 GLE1Q53GS7 698 aaKnown RBP19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 LIN9Q5TKA1 542 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 TDHQ8IZJ6 230 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 ANKRD52Q8NB46 1076 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 PLVAPQ9BX97 442 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 ZBP1Q9H171 429 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 HESX1Q9UBX0 185 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 CEP83Q9Y592 693 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 CHD7Q9P2D1 2997 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 TULP2O00295 520 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 CLUL1Q15846 466 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms