RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SSC5DA1L4H1 1573 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 B4GALT4O60513 344 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 OR6B2Q6IFH4 312 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 POLNQ7Z5Q5 900 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 PDIK1LQ8N165 341 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 ATP11CQ8NB49 1132 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 PIWIL1Q96J94 861 aaKnown RBP18.24■□□□□ 0.51
COL9A1-201ENST00000320755 WDR83Q9BRX9 315 aaKnown RBP18.24■□□□□ 0.51
COL9A1-201ENST00000320755 PTPRHQ9HD43 1115 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL9A1-201ENST00000320755 GPATCH2LQ9NWQ4 482 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 HAO1Q9UJM8 370 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 FARP1Q9Y4F1 1045 aaPredicted RBP18.24■□□□□ 0.51
COL9A1-201ENST00000320755 MCF2LO15068 1137 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 MSH2P43246 934 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 LRRC37BQ96QE4 947 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 FZD8Q9H461 694 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 A0A087WZ62 844 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 H7C0C1 242 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 PHBP35232 272 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 ATP5OP48047 213 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 FAXCQ5TGI0 409 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 IGDCC3Q8IVU1 814 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 C12orf29Q8N999 325 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 NAT8LQ8N9F0 302 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 KCNN1Q92952 543 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 FDXACB1Q9BRP7 624 aaPredicted RBP18.23■□□□□ 0.51
COL9A1-201ENST00000320755 TACO1Q9BSH4 297 aaKnown RBP18.23■□□□□ 0.51
COL9A1-201ENST00000320755 NPHS2Q9NP85 383 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 UBN1Q9NPG3 1134 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 RNF19AQ9NV58 838 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 SMG5Q9UPR3 1016 aaKnown RBP18.23■□□□□ 0.51
COL9A1-201ENST00000320755 AKT3Q9Y243 479 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 GINS2Q9Y248 185 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 SOCS7O14512 581 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 VTNP04004 478 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 NEFHP12036 1026 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 MBTD1Q05BQ5 628 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
COL9A1-201ENST00000320755 RNF43Q68DV7 783 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 PCGF5Q86SE9 256 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 TDRPQ86YL5 185 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 CCDC33Q8N5R6 958 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 TTC13Q8NBP0 860 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 GRAMD1AQ96CP6 724 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 TMEM176AQ96HP8 235 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 CHKBQ9Y259 395 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 HEY1Q9Y5J3 304 aa18.23■□□□□ 0.51
COL9A1-201ENST00000320755 PRPF4O43172 522 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL9A1-201ENST00000320755 PDGFRAP16234 1089 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 PROZP22891 400 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 YWHAGP61981 247 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL9A1-201ENST00000320755 ZNF268Q14587 947 aaPredicted RBP18.22■□□□□ 0.51
COL9A1-201ENST00000320755 PDK4Q16654 411 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 NOL9Q5SY16 702 aaKnown RBP18.22■□□□□ 0.51
COL9A1-201ENST00000320755 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
COL9A1-201ENST00000320755 TCP10LQ8TDR4 215 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 ZNF75CPQ92670 426 aaPredicted RBP18.22■□□□□ 0.51
COL9A1-201ENST00000320755 PEBP4Q96S96 227 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 LHX5Q9H2C1 402 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 SLC17A7Q9P2U7 560 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 IGKV6-21A0A0C4DH24 114 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 PTPN7P35236 360 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 ELK3P41970 407 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 KCTD2Q14681 263 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 HPDLQ96IR7 371 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 SLC24A2Q9UI40 661 aa18.22■□□□□ 0.51
COL9A1-201ENST00000320755 TYROBPO43914 113 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 TRUB2O95900 331 aaKnown RBP18.21■□□□□ 0.51
COL9A1-201ENST00000320755 DPYSL3Q14195 570 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 EFHC2Q5JST6 749 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 KIRREL3Q8IZU9 778 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.21■□□□□ 0.51
COL9A1-201ENST00000320755 NCAPGQ9BPX3 1015 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 STARD13Q9Y3M8 1113 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 MCM3APO60318 1980 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 WLSQ5T9L3 541 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 OTOAQ7RTW8 1153 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 RXFP2Q8WXD0 754 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
COL9A1-201ENST00000320755 ARHGEF3Q9NR81 526 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 SENP1Q9P0U3 644 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 E5RJQ4 531 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 EDF1O60869 148 aaKnown RBP18.21■□□□□ 0.51
COL9A1-201ENST00000320755 UNC5CO95185 931 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 CBX6O95503 412 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 INSRRP14616 1297 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 NDST1P52848 882 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 RNASELQ05823 741 aaKnown RBP18.21■□□□□ 0.51
COL9A1-201ENST00000320755 N4BP2L2Q92802 583 aaPredicted RBP18.21■□□□□ 0.51
COL9A1-201ENST00000320755 CFAP36Q96G28 342 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 SMARCAD1Q9H4L7 1026 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 IKBKGQ9Y6K9 419 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 USH1CQ9Y6N9 552 aa18.21■□□□□ 0.51
COL9A1-201ENST00000320755 APOC4-APOC2K7ER74 178 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 CILPO75339 1184 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 ANP32DO95626 131 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 APOC2P02655 101 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 ALDH3A1P30838 453 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 CCDC142Q17RM4 750 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms