RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 N4BP2L1Q5TBK1 243 aaPredicted RBP15.21■□□□□ 0.03
RPP40-201ENST00000319533 FAM173BQ6P4H8 233 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 MYLPFQ96A32 169 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 SYT15Q9BQS2 421 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 LSM14BQ9BX40 385 aaKnown RBP15.21■□□□□ 0.03
RPP40-201ENST00000319533 LINC00597Q9H2U6 94 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 LAMA1P25391 3075 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 PTPRDP23468 1912 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 HELZP42694 1942 aaKnown RBP15.2■□□□□ 0.02
RPP40-201ENST00000319533 OLFM2O95897 454 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 HOXD13P35453 343 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 OPRD1P41143 372 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 KCNB1Q14721 858 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 ELF2Q15723 593 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 GAB4Q2WGN9 574 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 LMBRD2Q68DH5 695 aaPredicted RBP15.2■□□□□ 0.02
RPP40-201ENST00000319533 RASSF3Q86WH2 238 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 CBWD2Q8IUF1 395 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 CCDC65Q8IXS2 484 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 MYCBPAPQ8TBZ2 947 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 USP33Q8TEY7 942 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 SMOC1Q9H4F8 434 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 KIAA1586Q9HCI6 787 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 ANGPTL2Q9UKU9 493 aa15.2■□□□□ 0.02
RPP40-201ENST00000319533 BCLAF3A2AJT9 711 aaKnown RBP15.19■□□□□ 0.02
RPP40-201ENST00000319533 ZNF840PA6NDX5 716 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 K7EQS6 105 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 DCLK1O15075 740 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 TACC1O75410 805 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 NFATC1O95644 943 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 TNNC2P02585 160 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 BDNFP23560 247 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 PPP3CCP48454 512 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 USP46P62068 366 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 PSMC1P62191 440 aaKnown RBP15.19■□□□□ 0.02
RPP40-201ENST00000319533 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
RPP40-201ENST00000319533 SLC7A9P82251 487 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 CNNM4Q6P4Q7 775 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 STXBP4Q6ZWJ1 553 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 EPM2AIP1Q7L775 607 aaPredicted RBP15.19■□□□□ 0.02
RPP40-201ENST00000319533 C11orf74Q86VG3 221 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 WDR49Q8IV35 697 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 C8orf48Q96LL4 319 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 ZNF396Q96N95 335 aaPredicted RBP15.19■□□□□ 0.02
RPP40-201ENST00000319533 USP28Q96RU2 1077 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 PANK2Q9BZ23 570 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 TNMDQ9H2S6 317 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 KBTBD4Q9NVX7 518 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 EHD2Q9NZN4 543 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
RPP40-201ENST00000319533 CEP295Q9C0D2 2601 aa15.19■□□□□ 0.02
RPP40-201ENST00000319533 LEFTY2O00292 366 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 TRIM66O15016 1216 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 EIF3DO15371 548 aaKnown RBP eCLIP15.18■□□□□ 0.02
RPP40-201ENST00000319533 KCNK5O95279 499 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 CAVIN2O95810 425 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 CHRM1P11229 460 aaPredicted RBP15.18■□□□□ 0.02
RPP40-201ENST00000319533 GRIK1P39086 918 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 ANP32AP39687 249 aaKnown RBP15.18■□□□□ 0.02
RPP40-201ENST00000319533 NASPP49321 788 aaPredicted RBP15.18■□□□□ 0.02
RPP40-201ENST00000319533 STK38Q15208 465 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 E2F4Q16254 413 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 PMS2CLQ68D20 193 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 TRAPPC11Q7Z392 1133 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 ADGRG2Q8IZP9 1017 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 ZNF507Q8TCN5 953 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 PCED1BQ96HM7 432 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 LRRC27Q9C0I9 530 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 HSPBP1Q9NZL4 362 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 NME7Q9Y5B8 376 aa15.18■□□□□ 0.02
RPP40-201ENST00000319533 A0A0A0MRY4 1105 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 TULP1O00294 542 aaPredicted RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 STAU1O95793 577 aaKnown RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 OAS1P00973 400 aaKnown RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 CST3P01034 146 aaPredicted RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 PDGFRBP09619 1106 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 ZSCAN22P10073 491 aaPredicted RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 ANXA13P27216 316 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 DGKEP52429 567 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 MRPS21P82921 87 aaKnown RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 PSMD2Q13200 908 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 RNF43Q68DV7 783 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 TCEAL6Q6IPX3 200 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 TSTD1Q8NFU3 115 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 NOC3LQ8WTT2 800 aaKnown RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 TCEAL3Q969E4 200 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 HPS3Q969F9 1004 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 CHAMP1Q96JM3 812 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 CNOT6LQ96LI5 555 aaKnown RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 MRPL45Q9BRJ2 306 aaKnown RBP15.17■□□□□ 0.02
RPP40-201ENST00000319533 TRIM9Q9C026 710 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 RNF38Q9H0F5 515 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 CUEDC2Q9H467 287 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 MMP17Q9ULZ9 603 aa15.17■□□□□ 0.02
RPP40-201ENST00000319533 CHD6Q8TD26 2715 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 ABCA7Q8IZY2 2146 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms