RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 THOC1Q96FV9 657 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 SCYL1Q96KG9 808 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 IGF2BP3O00425 579 aaKnown RBP eCLIP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 FNTAP49354 379 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 IL9RQ01113 521 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 KCNA10Q16322 511 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 C15orf59Q2T9L4 293 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 EFCAB13Q8IY85 973 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 EXD1Q8NHP7 514 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 GSDMBQ8TAX9 411 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 DEPDC1BQ8WUY9 529 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 SENP6Q9GZR1 1112 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 TTLL13PA6NNM8 815 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 HMGCRP04035 888 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 PLA2G4AP47712 749 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 C3orf20Q8ND61 904 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 SEPT8Q92599 483 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 FZD8Q9H461 694 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 TPX2Q9ULW0 747 aaKnown RBP9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 IPPQ9Y573 584 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 RBAK-RBAKDNI3L0D1 243 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 ATP9BO43861 1147 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 BRAFP15056 766 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 HSD17B3P37058 310 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 LHX1P48742 406 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 GUCY1A3Q02108 690 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 CENPCQ03188 943 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 ZNF268Q14587 947 aaPredicted RBP9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 SLC10A6Q3KNW5 377 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 CTXN3Q4LDR2 81 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 PDCD6IPQ8WUM4 868 aaKnown RBP9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 RILPQ96NA2 401 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 C10orf88Q9H8K7 445 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 KIF9Q9HAQ2 790 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 CHST7Q9NS84 486 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 FAM105AQ9NUU6 356 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 SAE1Q9UBE0 346 aaPredicted RBP9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 CHMP2BQ9UQN3 213 aa9.71□□□□□ -0.85
TMEM39A-201ENST00000319172 COL1A2P08123 1366 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 CNTNAP2Q9UHC6 1331 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 SMIM28A0A1B0GU29 152 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 ANKRD65E5RJM6 399 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 FAM153BP0C7A2 387 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 MIPP30301 263 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 CCL23P55773 120 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 YWHAHQ04917 246 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 IFT88Q13099 833 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 ITGA7Q13683 1181 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 GRB14Q14449 540 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 CNGA2Q16280 664 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 FAM153CQ494X1 144 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 ZNF662Q6ZS27 426 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 ATP11CQ8NB49 1132 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 MRPL45Q9BRJ2 306 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 FSD1LQ9BXM9 530 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 XPO7Q9UIA9 1087 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-201ENST00000319172 A0A087WUV0 522 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 PRRG1O14668 218 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 PPP1R12AO14974 1030 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 LGR5O75473 907 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 CYP1A2P05177 515 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 VEPH1Q14D04 833 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 SYDE1Q6ZW31 735 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 SH3TC2Q8TF17 1288 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 FIZ1Q96SL8 496 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 KLHL14Q9P2G3 628 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 NUDT5Q9UKK9 219 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 AP4E1Q9UPM8 1137 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 GOLGA8RI6L899 631 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 BDNFP23560 247 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 ANKRD20A3Q5VUR7 823 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 FAM47EQ6ZV65 393 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 RASAL3Q86YV0 1011 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 RUBCNQ92622 972 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 DDX27Q96GQ7 796 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 TMEM169Q96HH4 297 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 WDCPQ9H6R7 721 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 VIPAS39Q9H9C1 493 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 TRPC7Q9HCX4 862 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 TJP2Q9UDY2 1190 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 COG5Q9UP83 839 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 TBKBP1A7MCY6 615 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 STK25O00506 426 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 SPAG7O75391 227 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 ATG7O95352 703 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 VNN1O95497 513 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 SETSIPP0DME0 302 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 TROVE2P10155 538 aaKnown RBP eCLIP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 EDNRBP24530 442 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 GARSP41250 739 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 RAB27AP51159 221 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 MAPRE1Q15691 268 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 CCDC6Q16204 474 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 C10orf120Q5SQS8 335 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 NUGGCQ68CJ6 796 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 CCDC62Q6P9F0 684 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 DEFB106AQ8N104 65 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 TTC25Q96NG3 672 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 COLEC11Q9BWP8 271 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms