RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 GUCA1CO95843 209 aa19.7■□□□□ 0.74
UBE2N-201ENST00000318066 IFNA14P01570 189 aa19.7■□□□□ 0.74
UBE2N-201ENST00000318066 LAMC2Q13753 1193 aa19.7■□□□□ 0.74
UBE2N-201ENST00000318066 MDM1Q8TC05 714 aa19.7■□□□□ 0.74
UBE2N-201ENST00000318066 ZNF507Q8TCN5 953 aa19.7■□□□□ 0.74
UBE2N-201ENST00000318066 PRRG3Q9BZD7 231 aa19.7■□□□□ 0.74
UBE2N-201ENST00000318066 KRCC1Q9NPI7 259 aaPredicted RBP19.7■□□□□ 0.74
UBE2N-201ENST00000318066 SHOC2Q9UQ13 582 aa19.7■□□□□ 0.74
UBE2N-201ENST00000318066 IMPDH2P12268 514 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 CDKAL1Q5VV42 579 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 ZNF333Q96JL9 665 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 SLITRK1Q96PX8 696 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 GPR63Q9BZJ6 419 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 STX7O15400 261 aaKnown RBP19.69■□□□□ 0.74
UBE2N-201ENST00000318066 RPLP2P05387 115 aaKnown RBP19.69■□□□□ 0.74
UBE2N-201ENST00000318066 SSTR3P32745 418 aaPredicted RBP19.69■□□□□ 0.74
UBE2N-201ENST00000318066 MTMR2Q13614 643 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 ATXN2LQ8WWM7 1075 aaKnown RBP19.69■□□□□ 0.74
UBE2N-201ENST00000318066 KLHL4Q9C0H6 718 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 SYTL2Q9HCH5 934 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 NCAM2O15394 837 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 ASMTLO95671 621 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 EIF2S1P05198 315 aaKnown RBP19.69■□□□□ 0.74
UBE2N-201ENST00000318066 NKX1-1Q15270 411 aaPredicted RBP19.69■□□□□ 0.74
UBE2N-201ENST00000318066 ACBD5Q5T8D3 534 aaPredicted RBP19.69■□□□□ 0.74
UBE2N-201ENST00000318066 ZNF786Q8N393 782 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 VPS50Q96JG6 964 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 MMADHCQ9H3L0 296 aaPredicted RBP19.69■□□□□ 0.74
UBE2N-201ENST00000318066 MAGEB16A2A368 324 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 PTPN7P35236 360 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 ATP8B4Q8TF62 1192 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 NCKIPSDQ9NZQ3 722 aa19.69■□□□□ 0.74
UBE2N-201ENST00000318066 ALKQ9UM73 1620 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 C2orf81A6NN90 581 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 VPS26AO75436 327 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 PROSCO94903 275 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 TCN1P20061 433 aaPredicted RBP19.68■□□□□ 0.74
UBE2N-201ENST00000318066 CHRM3P20309 590 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 KRT20P35900 424 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 EIF2B5Q13144 721 aaKnown RBP19.68■□□□□ 0.74
UBE2N-201ENST00000318066 GLB1LQ6UWU2 654 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 FBXO36Q8NEA4 188 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 AGBL1Q96MI9 1066 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 HARS2P49590 506 aaKnown RBP19.68■□□□□ 0.74
UBE2N-201ENST00000318066 LRRC8DQ7L1W4 858 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 PPP2R3CQ969Q6 453 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 KCNH7Q9NS40 1196 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 IQCA1LA6NCM1 817 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 TCF3P15923 654 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 PKN2Q16513 984 aaKnown RBP19.68■□□□□ 0.74
UBE2N-201ENST00000318066 VPS33AQ96AX1 596 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 BRD8Q9H0E9 1235 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 MUC3BQ9H195 1237 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 RAB21Q9UL25 225 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 CDC42BPAQ5VT25 1732 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 SMAD1Q15797 465 aaKnown RBP19.68■□□□□ 0.74
UBE2N-201ENST00000318066 PRMT9Q6P2P2 845 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 TRAF7Q6Q0C0 670 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 C19orf60Q96EN9 201 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 MRPL48Q96GC5 212 aaKnown RBP19.68■□□□□ 0.74
UBE2N-201ENST00000318066 SPATA17Q96L03 361 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 CYP3A43Q9HB55 503 aa19.68■□□□□ 0.74
UBE2N-201ENST00000318066 KLK7P49862 253 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 CNTN1Q12860 1018 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 GRB10Q13322 594 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 KDELC2Q7Z4H8 507 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 SLC22A9Q8IVM8 553 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 ZNF668Q96K58 619 aaPredicted RBP19.67■□□□□ 0.74
UBE2N-201ENST00000318066 THUMPD3Q9BV44 507 aaKnown RBP19.67■□□□□ 0.74
UBE2N-201ENST00000318066 ADAM33Q9BZ11 813 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 CDC42EP4Q9H3Q1 356 aaKnown RBP19.67■□□□□ 0.74
UBE2N-201ENST00000318066 KCNH4Q9UQ05 1017 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 RNF17Q9BXT8 1623 aaKnown RBP19.67■□□□□ 0.74
UBE2N-201ENST00000318066 FBXO21O94952 628 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 MAPTP10636 758 aaKnown RBP19.67■□□□□ 0.74
UBE2N-201ENST00000318066 PTENP60484 403 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 CDC42EP5Q6NZY7 148 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 TAF2Q6P1X5 1199 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 MAGED4Q96JG8 741 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 F8W810 466 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 EPHB2P29323 1055 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.67■□□□□ 0.744e-6■■■■□ 26
UBE2N-201ENST00000318066 TMPRSS6Q8IU80 811 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 FOXN3O00409 490 aaPredicted RBP19.67■□□□□ 0.74
UBE2N-201ENST00000318066 CLPTM1O96005 669 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 PDGFRBP09619 1106 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 NAMPTP43490 491 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 BBS2Q9BXC9 721 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 PCDH9Q9HC56 1237 aa19.67■□□□□ 0.74
UBE2N-201ENST00000318066 CLTCL1P53675 1640 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 RRM2P31350 389 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 CPA2P48052 419 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 PRIM2P49643 509 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 MTA1Q13330 715 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 CEP78Q5JTW2 689 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 CHSY1Q86X52 802 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 YAF2Q8IY57 180 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 EPS8L3Q8TE67 593 aaKnown RBP19.66■□□□□ 0.74
UBE2N-201ENST00000318066 PAFAH2Q99487 392 aa19.66■□□□□ 0.74
UBE2N-201ENST00000318066 WWOXQ9NZC7 414 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms