RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ATG7O95352 703 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 RARBP10826 455 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 RFC1P35251 1148 aaPredicted RBP19.98■□□□□ 0.79
RTN4-201ENST00000317610 MEX3CQ5U5Q3 659 aaKnown RBP19.98■□□□□ 0.79
RTN4-201ENST00000317610 TFAP2BQ92481 460 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 STX18Q9P2W9 335 aaKnown RBP19.98■□□□□ 0.79
RTN4-201ENST00000317610 ASB3Q9Y575 518 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.97■□□□□ 0.79
RTN4-201ENST00000317610 LRRIQ4A6NIV6 560 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 STAM2O75886 525 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 HADHQ16836 314 aaKnown RBP19.97■□□□□ 0.79
RTN4-201ENST00000317610 IGDCC3Q8IVU1 814 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 ZBED3Q96IU2 234 aaPredicted RBP19.97■□□□□ 0.79
RTN4-201ENST00000317610 ZWILCHQ9H900 591 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 ZBTB12Q9Y330 459 aaPredicted RBP19.97■□□□□ 0.79
RTN4-201ENST00000317610 TCRBV9S1A1TA0A576 114 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 SPDYE5A6NIY4 337 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 ZNF200P98182 395 aaPredicted RBP19.97■□□□□ 0.79
RTN4-201ENST00000317610 SP4Q02446 784 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 ZBTB16Q05516 673 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 SMTNL2Q2TAL5 461 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 TMEM154Q6P9G4 183 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 VPS52Q8N1B4 723 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 NSUN6Q8TEA1 469 aaKnown RBP19.97■□□□□ 0.79
RTN4-201ENST00000317610 MCUR1Q96AQ8 359 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 OXNAD1Q96HP4 312 aaPredicted RBP19.97■□□□□ 0.79
RTN4-201ENST00000317610 FAM111AQ96PZ2 611 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 ARHGEF4Q9NR80 690 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 CHMP2BQ9UQN3 213 aa19.97■□□□□ 0.79
RTN4-201ENST00000317610 A8MXQ7 604 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 APOC4-APOC2K7ER74 178 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 FAM189A1O60320 539 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 SPAG6O75602 509 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 APOC2P02655 101 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 BGNP21810 368 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 SP100P23497 879 aaPredicted RBP19.96■□□□□ 0.79
RTN4-201ENST00000317610 ELK3P41970 407 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 MYL6P60660 151 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 FAAP100Q0VG06 881 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 DPYSL3Q14195 570 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 PTPN20Q4JDL3 420 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 CCDC62Q6P9F0 684 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 LRRC74BQ6ZQY2 392 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 KRT27Q7Z3Y8 459 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 KIAA0319LQ8IZA0 1049 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 JOSD2Q8TAC2 188 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 SCG3Q8WXD2 468 aaKnown RBP19.96■□□□□ 0.79
RTN4-201ENST00000317610 RPAP3Q9H6T3 665 aaPredicted RBP19.96■□□□□ 0.79
RTN4-201ENST00000317610 PNPLA8Q9NP80 782 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 TEX264Q9Y6I9 313 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 EME2A4GXA9 379 aaPredicted RBP19.96■□□□□ 0.79
RTN4-201ENST00000317610 ENO4A6NNW6 628 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 SPATA31C2B4DYI2 1134 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 FCHO1O14526 889 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 CAPN9O14815 690 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 TBX10O75333 385 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 ESRRAP11474 423 aaPredicted RBP19.96■□□□□ 0.79
RTN4-201ENST00000317610 KRT3P12035 628 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 SKIP12755 728 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 SERPINB4P48594 390 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 RAP1GDS1P52306 607 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 SESN3P58005 492 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 MXRA7P84157 204 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 AP1B1Q10567 949 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 PAXIP1Q6ZW49 1069 aaPredicted RBP19.96■□□□□ 0.79
RTN4-201ENST00000317610 WDR60Q8WVS4 1066 aa19.96■□□□□ 0.79
RTN4-201ENST00000317610 MAFBQ9Y5Q3 323 aaPredicted RBP19.96■□□□□ 0.79
RTN4-201ENST00000317610 COL11A1P12107 1806 aaPredicted RBP19.95■□□□□ 0.78
RTN4-201ENST00000317610 UPP2O95045 317 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 OATP04181 439 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 CD48P09326 243 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 MYL2P10916 166 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 POLR2BP30876 1174 aaKnown RBP19.95■□□□□ 0.78
RTN4-201ENST00000317610 EIF3EP60228 445 aaKnown RBP19.95■□□□□ 0.78
RTN4-201ENST00000317610 KBTBD12Q3ZCT8 623 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 SEZ6Q53EL9 994 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 ZNF394Q53GI3 561 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 KCNT1Q5JUK3 1230 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 FAM71DQ8N9W8 422 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 CMASQ8NFW8 434 aaPredicted RBP19.95■□□□□ 0.78
RTN4-201ENST00000317610 TTC17Q96AE7 1141 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 ATG4CQ96DT6 458 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 WNK4Q96J92 1243 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 LHX5Q9H2C1 402 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 VCXQ9H320 206 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 ZNF212Q9UDV6 495 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 COL4A5P29400 1685 aa19.95■□□□□ 0.78
RTN4-201ENST00000317610 KBTBD13C9JR72 458 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 C1QAP02745 245 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 INHBAP08476 426 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 PYGBP11216 843 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 KCNJ11Q14654 390 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 OR52E8Q6IFG1 317 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 DENND1BQ6P3S1 775 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 ZPBP2Q6X784 338 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 IFT43Q96FT9 208 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 MTMR12Q9C0I1 747 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.94■□□□□ 0.782e-6■□□□□ 10
RTN4-201ENST00000317610 IKBKGQ9Y6K9 419 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 MAGEC1O60732 1142 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms