RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 MTMR3Q13615 1198 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 MBTPS1Q14703 1052 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 GOLGA7BQ2TAP0 167 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 DEFB115Q30KQ5 88 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 GNASQ5JWF2 1037 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 TXNRD3NBQ6F5E7 133 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 CXCL17Q6UXB2 119 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 SCARA5Q6ZMJ2 495 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 ATL2Q8NHH9 583 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 ZIM3Q96PE6 472 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 TMBIM4Q9HC24 238 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 PAK6Q9NQU5 681 aaPredicted RBP7.55□□□□□ -1.2
NPHP1-201ENST00000316534 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
NPHP1-201ENST00000316534 UTP11Q9Y3A2 253 aaKnown RBP7.55□□□□□ -1.2
NPHP1-201ENST00000316534 ARL5CA6NH57 179 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 ZMYND10O75800 440 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 FAM155BO75949 473 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 C6orf222P0C671 652 aaPredicted RBP7.55□□□□□ -1.2
NPHP1-201ENST00000316534 GRIK3Q13003 919 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 RASA2Q15283 850 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 TTMPQ5BVD1 217 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 STRADAQ7RTN6 431 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 TLCD1Q96CP7 247 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 DUSP16Q9BY84 665 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 ADAM33Q9BZ11 813 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 ACBD3Q9H3P7 528 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 DPEP3Q9H4B8 488 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 CHST7Q9NS84 486 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 RCOR3Q9P2K3 495 aaPredicted RBP7.55□□□□□ -1.2
NPHP1-201ENST00000316534 HES2Q9Y543 173 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 PTCH2Q9Y6C5 1203 aa7.55□□□□□ -1.2
NPHP1-201ENST00000316534 DAPK3O43293 454 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 DAB1O75553 588 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CPP00450 1065 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 IGLV3-25P01717 112 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 RALAP11233 206 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 TYMPP19971 482 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 GPD1P21695 349 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 AKAP5P24588 427 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 HOXD10P28358 340 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 TKTP29401 623 aaKnown RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 GGCXP38435 758 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 AIF1P55008 147 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 DPYSL2Q16555 572 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 AGBL2Q5U5Z8 902 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 MFSD7Q6UXD7 560 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 RTN4RL1Q86UN2 441 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 KLHL7Q8IXQ5 586 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 FUKQ8N0W3 1084 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CCHCR1Q8TD31 782 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 IPO4Q8TEX9 1081 aaKnown RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 RAPGEF5Q92565 580 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 SPC25Q9HBM1 224 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 ST7Q9NRC1 585 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 TMEM51Q9NW97 253 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 FEZ2Q9UHY8 353 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 RASAL2Q9UJF2 1139 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CHD5Q8TDI0 1954 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 E5RJQ4 531 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 M0QYV0 167 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 NDC80O14777 642 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 GJB6O95452 261 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 PGK1P00558 417 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 PSMC1P62191 440 aaKnown RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 SCAPQ12770 1279 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 ITGA7Q13683 1181 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 PTGISQ16647 500 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CYP4A22Q5TCH4 519 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 PM20D1Q6GTS8 502 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 C3orf58Q8NDZ4 430 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 DPF3Q92784 378 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 LRRC45Q96CN5 670 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 PIWIL1Q96J94 861 aaKnown RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 TRIM51Q9BSJ1 452 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 METTL5Q9NRN9 209 aaKnown RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 MTMR10Q9NXD2 777 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 IL37Q9NZH6 218 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 ZMYND8Q9ULU4 1186 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 PADI3Q9ULW8 664 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 SCN5AQ14524 2016 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 E7ESA3 106 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CXCL10P02778 98 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 KRT19P08727 400 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CKBP12277 381 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 RARGP13631 454 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CAPN2P17655 700 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 LMO2P25791 158 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 LHX1P48742 406 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 MNX1P50219 401 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 VCPP55072 806 aaKnown RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 SNX16P57768 344 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 LMNB2Q03252 620 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 SEMA3BQ13214 749 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 PDK2Q15119 407 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 C2CD6Q53TS8 623 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 ZNF618Q5T7W0 954 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 MFSD5Q6N075 450 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 SND1Q7KZF4 910 aaKnown RBP eCLIP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 ECHDC2Q86YB7 292 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms