RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CNPY3Q9BT09 278 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 SENP6Q9GZR1 1112 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-201ENST00000315286 RAB6CQ9H0N0 254 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 SNX25Q9H3E2 840 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 XPNPEP3Q9NQH7 507 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 AAASQ9NRG9 546 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 USP18Q9UMW8 372 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 HMGB1P1B2RPK0 211 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-201ENST00000315286 SHBGP04278 402 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 ASGR1P07306 291 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 RARGP13631 454 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 KLRC2P26717 231 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 SLC29A2Q14542 456 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 SLMAPQ14BN4 828 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 C15orf59Q2T9L4 293 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-201ENST00000315286 OLFML1Q6UWY5 402 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 CCDC25Q86WR0 208 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 CCDC89Q8N998 374 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 CMASQ8NFW8 434 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-201ENST00000315286 PPP1R10Q96QC0 940 aaKnown RBP19.28■□□□□ 0.68
CCDC43-201ENST00000315286 ZNF148Q9UQR1 794 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 NUDT17P0C025 328 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 IGFBP6P24592 240 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-201ENST00000315286 ADORA2BP29275 332 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 PCK1P35558 622 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 IFFO1Q0D2I5 559 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 KCNA10Q16322 511 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 TAZQ16635 292 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 KHSRPQ92945 711 aaKnown RBP eCLIP19.28■□□□□ 0.68
CCDC43-201ENST00000315286 PEBP4Q96S96 227 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 B3GNT5Q9BYG0 378 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 OSBPL7Q9BZF2 842 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 FAM105AQ9NUU6 356 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 EFR3BQ9Y2G0 817 aa19.28■□□□□ 0.68
CCDC43-201ENST00000315286 PAPSS1O43252 624 aaPredicted RBP19.27■□□□□ 0.68
CCDC43-201ENST00000315286 HUS1O60921 280 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 ELNP15502 786 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 LRPAP1P30533 357 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 CHKAP35790 457 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 EIF3BP55884 814 aaKnown RBP19.27■□□□□ 0.68
CCDC43-201ENST00000315286 DYNLT1P63172 113 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 SLC6A3Q01959 620 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 LMNB2Q03252 620 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 DENND2CQ68D51 928 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 ANKRD52Q8NB46 1076 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 GLIS1Q8NBF1 620 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 KCTD6Q8NC69 237 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 GSTCDQ8NEC7 633 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 STK32AQ8WU08 396 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 HSPH1Q92598 858 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 TRAIPQ9BWF2 469 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 SAE1Q9UBE0 346 aaPredicted RBP19.27■□□□□ 0.68
CCDC43-201ENST00000315286 ANAPC5Q9UJX4 755 aa19.27■□□□□ 0.68
CCDC43-201ENST00000315286 DRG1Q9Y295 367 aaKnown RBP19.27■□□□□ 0.68
CCDC43-201ENST00000315286 HTTP42858 3142 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 GRIN2DO15399 1336 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 DCAF8L1A6NGE4 600 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 CST8O60676 142 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 AOC2O75106 756 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 AFF1P51825 1210 aaKnown RBP19.26■□□□□ 0.67
CCDC43-201ENST00000315286 MGAT3Q09327 533 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 OASLQ15646 514 aaKnown RBP19.26■□□□□ 0.67
CCDC43-201ENST00000315286 CDO1Q16878 200 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 KRT71Q3SY84 523 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 CCDC14Q49A88 953 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 OSTM1Q86WC4 334 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 ADGRF2Q8IZF7 708 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 CFAP57Q96MR6 1250 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 AGO3Q9H9G7 860 aaKnown RBP19.26■□□□□ 0.67
CCDC43-201ENST00000315286 RNF186Q9NXI6 227 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 BCCIPQ9P287 314 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCDC43-201ENST00000315286 CACNG4Q9UBN1 327 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 ZSCAN5DPP0CG00 497 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 PRKAR2AP13861 404 aaKnown RBP19.26■□□□□ 0.67
CCDC43-201ENST00000315286 MLH1P40692 756 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 ATP1A2P50993 1020 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 VCPP55072 806 aaKnown RBP19.26■□□□□ 0.67
CCDC43-201ENST00000315286 SKOR1P84550 965 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 CYP4V2Q6ZWL3 525 aaPredicted RBP19.26■□□□□ 0.67
CCDC43-201ENST00000315286 ALLCQ8N6M5 410 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 KLHDC9Q8NEP7 349 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 LPPQ93052 612 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 NKD2Q969F2 451 aaPredicted RBP19.26■□□□□ 0.67
CCDC43-201ENST00000315286 GAD1Q99259 594 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 CHST12Q9NRB3 414 aa19.26■□□□□ 0.67
CCDC43-201ENST00000315286 BRCA2P51587 3418 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 RIPK2O43353 540 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 SHOX2O60902 331 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-201ENST00000315286 ETS1P14921 441 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 NR1D1P20393 614 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 ATP11AP98196 1134 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 CAV1Q03135 178 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 BST2Q10589 180 aaKnown RBP19.25■□□□□ 0.67
CCDC43-201ENST00000315286 CCSAPQ6IQ19 270 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-201ENST00000315286 KDM7AQ6ZMT4 941 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 BBS12Q6ZW61 710 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 RPAINQ86UA6 219 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 TOP6BLQ8N6T0 577 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 SMC1BQ8NDV3 1235 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 UHMK1Q8TAS1 419 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms