RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CCDC60Q8IWA6 550 aaPredicted RBP14.06□□□□□ -0.16
SKA3-202ENST00000314759 UNC45BQ8IWX7 931 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 PDIK1LQ8N165 341 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 ARFGAP1Q8N6T3 406 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 UBR7Q8N806 425 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 NIPA2Q8N8Q9 360 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 B4GALNT2Q8NHY0 566 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 TTC17Q96AE7 1141 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 CGRRF1Q99675 332 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 ARMCX1Q9P291 453 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 XPO7Q9UIA9 1087 aaKnown RBP14.06□□□□□ -0.16
SKA3-202ENST00000314759 CHMP2BQ9UQN3 213 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 CNTNAP2Q9UHC6 1331 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
SKA3-202ENST00000314759 RARBP10826 455 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 MYL2P10916 166 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 AMPD1P23109 780 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 NRLP54845 237 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 PRKCEQ02156 737 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 AP1B1Q10567 949 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.06□□□□□ -0.16
SKA3-202ENST00000314759 RSAD2Q8WXG1 361 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 TMEM143Q96AN5 459 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 TRAPPC9Q96Q05 1148 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 OCEL1Q9H607 264 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 STX18Q9P2W9 335 aaKnown RBP14.06□□□□□ -0.16
SKA3-202ENST00000314759 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 FAM237BA0A1B0GVD1 139 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 H0YCG3 227 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 LSM8O95777 96 aaKnown RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 RFC1P35251 1148 aaPredicted RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 SLC25A11Q02978 314 aaKnown RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 FAAP100Q0VG06 881 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 PTK7Q13308 1070 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 CUL3Q13618 768 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 THOC5Q13769 683 aaKnown RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 MTERF2Q49AM1 385 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 GPAT2Q6NUI2 795 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 POLNQ7Z5Q5 900 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 VSIG10LQ86VR7 867 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 OXNAD1Q96HP4 312 aaPredicted RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 CYTH2Q99418 400 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 MSTO1Q9BUK6 570 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 TARS2Q9BW92 718 aaKnown RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 MMADHCQ9H3L0 296 aaPredicted RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 ARHGEF4Q9NR80 690 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 CNTN3Q9P232 1028 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 MAGEA13PA6NCF6 341 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 E5RJQ4 531 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 FCHO1O14526 889 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 GSTA2P09210 222 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 CD48P09326 243 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 PYGBP11216 843 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 KCNA2P16389 499 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 CCDC62Q6P9F0 684 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 BBS12Q6ZW61 710 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 KIAA0319LQ8IZA0 1049 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 FAM71DQ8N9W8 422 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 TMEM35BQ8NCS4 154 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 APOPT1Q96IL0 206 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 UBE2OQ9C0C9 1292 aaKnown RBP14.05□□□□□ -0.16
SKA3-202ENST00000314759 NMUR2Q9GZQ4 415 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 FBXO40Q9UH90 709 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 EFR3BQ9Y2G0 817 aa14.05□□□□□ -0.16
SKA3-202ENST00000314759 IQANK1A0A1B0GTG1 560 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 TCRBV9S1A1TA0A576 114 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 LRCH4O75427 683 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 RGS20O76081 388 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 ITGBL1O95965 494 aaPredicted RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 EDN1P05305 212 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 NR3C2P08235 984 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 GSTT1P30711 240 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 ELK3P41970 407 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 CPA2P48052 419 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 SLC18A2Q05940 514 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 BAATQ14032 418 aaPredicted RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 KBTBD12Q3ZCT8 623 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 ALYREFQ86V81 257 aaKnown RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 TFAP2BQ92481 460 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 STMN2Q93045 179 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 A0A0B4J269 797 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 H0YIN7 160 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 PSAPP07602 524 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 PSMA2P25787 234 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 CHRNA5P30532 468 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 BASP1P80723 227 aaKnown RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 TAP1Q03518 808 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 EMC2Q15006 297 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 ARHGAP22Q7Z5H3 698 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 FBXO27Q8NI29 283 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 SLC44A1Q8WWI5 657 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 GPRASP2Q96D09 838 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 GBP5Q96PP8 586 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 STRIP2Q9ULQ0 834 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 K7ERI5 159 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 MAP3K7O43318 606 aa14.04□□□□□ -0.16
SKA3-202ENST00000314759 ASS1P00966 412 aaKnown RBP14.04□□□□□ -0.16
SKA3-202ENST00000314759 KDELR1P24390 212 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms