RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 AP5M1Q9H0R1 490 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 SGK1O00141 431 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 TJP3O95049 919 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 MAN1A1P33908 653 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 AFF1P51825 1210 aaKnown RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 CNGA2Q16280 664 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 QPCTQ16769 361 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 CYP4F22Q6NT55 531 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 SAPCD2Q86UD0 394 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 MAIP1Q8WWC4 291 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 PEBP4Q96S96 227 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 A8MXQ7 604 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 CHUKO15111 745 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 CETN2P41208 172 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 ARSEP51690 589 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 RABGGTBP53611 331 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 GDF10P55107 478 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 FSCN1Q16658 493 aaKnown RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 SOWAHAQ2M3V2 549 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 FAM47CQ5HY64 1035 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 CCDC33Q8N5R6 958 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 KCTD6Q8NC69 237 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 RXFP2Q8WXD0 754 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 MAGEB5Q9BZ81 275 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 CYP3A43Q9HB55 503 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 SMIM28A0A1B0GU29 152 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 MBLAC1A4D2B0 266 aaPredicted RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 BANF1O75531 89 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 RARGP13631 454 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 TFE3P19532 575 aaPredicted RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 GAD2Q05329 585 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 TRIM32Q13049 653 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 GPS1Q13098 491 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 DCAF4L1Q3SXM0 396 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 TWF2Q6IBS0 349 aaKnown RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 NPNTQ6UXI9 565 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 YTHDF3Q7Z739 585 aaKnown RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 ACTL9Q8TC94 416 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 GRK7Q8WTQ7 553 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 NDRG1Q92597 394 aaKnown RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 SELENOSQ9BQE4 189 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 OSBPL7Q9BZF2 842 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 NGRNQ9NPE2 291 aaKnown RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 HAUS2Q9NVX0 235 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 TBK1Q9UHD2 729 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
RNF4-201ENST00000314289 ZSWIM8A7E2V4 1837 aa13.04□□□□□ -0.32
RNF4-201ENST00000314289 SMIM35A0A1B0GVV1 85 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 C3orf70A6NLC5 250 aaPredicted RBP13.03□□□□□ -0.32
RNF4-201ENST00000314289 PIAS1O75925 651 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 HMGCRP04035 888 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 FGFR1P11362 822 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 ITIH2P19823 946 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 OTUD4Q01804 1114 aaKnown RBP13.03□□□□□ -0.32
RNF4-201ENST00000314289 INCA1Q0VD86 236 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 C9orf57Q5W0N0 161 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 PPP1R2P3Q6NXS1 205 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 C17orf99Q6UX52 265 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 ARFGAP2Q8N6H7 521 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 MRRFQ96E11 262 aaKnown RBP13.03□□□□□ -0.32
RNF4-201ENST00000314289 RUNDC3BQ96NL0 473 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 VRTNQ9H8Y1 702 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 WHRNQ9P202 907 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 USP18Q9UMW8 372 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 NEU2Q9Y3R4 380 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 GMNCA6NCL1 334 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 GABBR2O75899 941 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 RNF8O76064 485 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 ACAT1P24752 427 aaKnown RBP13.03□□□□□ -0.32
RNF4-201ENST00000314289 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
RNF4-201ENST00000314289 RHBDF2Q6PJF5 856 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 WNT8BQ93098 351 aa13.03□□□□□ -0.32
RNF4-201ENST00000314289 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
RNF4-201ENST00000314289 C17orf102A2RUQ5 167 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 RGS16O15492 202 aaPredicted RBP13.02□□□□□ -0.32
RNF4-201ENST00000314289 CREB1P16220 341 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 PECAM1P16284 738 aaPredicted RBP13.02□□□□□ -0.32
RNF4-201ENST00000314289 KDELR1P24390 212 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 KLRC2P26717 231 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 CPT1AP50416 773 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 ADAM17P78536 824 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 TAP1Q03518 808 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 FASTKD3Q14CZ7 662 aaKnown RBP13.02□□□□□ -0.32
RNF4-201ENST00000314289 E2F5Q15329 346 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 RGMBQ6NW40 437 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 ZC3H18Q86VM9 953 aaKnown RBP13.02□□□□□ -0.32
RNF4-201ENST00000314289 RFX6Q8HWS3 928 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 BEST2Q8NFU1 509 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.32
RNF4-201ENST00000314289 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.02□□□□□ -0.32
RNF4-201ENST00000314289 NUDT17P0C025 328 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 RARBP10826 455 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms