RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ACOT1Q86TX2 421 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 ALYREFQ86V81 257 aaKnown RBP15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 CELF5Q8N6W0 485 aaKnown RBP15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 SLC35C1Q96A29 364 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 CYP2S1Q96SQ9 504 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 SMOQ99835 787 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 NIF3L1Q9GZT8 377 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 CSNK1G1Q9HCP0 422 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 GTSE1Q9NYZ3 720 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 CHMP5Q9NZZ3 219 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 UXTQ9UBK9 157 aaPredicted RBP15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 COQ4Q9Y3A0 265 aa15.53■□□□□ 0.08
PPP1CA-201ENST00000312989 ZNF840PA6NDX5 716 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 TRIM66O15016 1216 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 CETN3O15182 167 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 CCDC130P13994 396 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 MRE11P49959 708 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 MXI1P50539 228 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 FKBP3Q00688 224 aaKnown RBP15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 GAS6Q14393 721 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 UBXN2BQ14CS0 331 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 TAF12Q16514 161 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 ARHGAP29Q52LW3 1261 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 FOXR2Q6PJQ5 311 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 ZNF852Q6ZMS4 543 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 UNC93AQ86WB7 457 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 C12orf29Q8N999 325 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 MRPS31Q92665 395 aaKnown RBP15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 MED15Q96RN5 788 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 ARID3AQ99856 593 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 TDP1Q9NUW8 608 aa15.52■□□□□ 0.08
PPP1CA-201ENST00000312989 HHLA1C9JL84 531 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 STK25O00506 426 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 KINO60870 393 aaKnown RBP15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 CILPO75339 1184 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 OAS1P00973 400 aaKnown RBP15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 EPB41P11171 864 aaKnown RBP15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 CHRNB1P11230 501 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 KRT13P13646 458 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 TCF3P15923 654 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 CTHP32929 405 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 RPS9P46781 194 aaKnown RBP15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 PGFP49763 221 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 C1orf210Q8IVY1 113 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 SLC2A14Q8TDB8 520 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 DHTKD1Q96HY7 919 aaPredicted RBP15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 RNF38Q9H0F5 515 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 MMRN2Q9H8L6 949 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 KIF9Q9HAQ2 790 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 CYP3A43Q9HB55 503 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 GREB1Q4ZG55 1949 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 F5P12259 2224 aa15.51■□□□□ 0.07
PPP1CA-201ENST00000312989 SPECC1L-ADORA2AF8WAN1 911 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 ZDHHC11BP0C7U3 371 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 TDGF1P13385 188 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 AVPR1AP37288 418 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 TAF10Q12962 218 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 TRIM68Q6AZZ1 485 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 UBR7Q8N806 425 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 ARL14EPQ8N8R7 260 aaPredicted RBP15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 SCAMP5Q8TAC9 235 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 FAM3CQ92520 227 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 NELL1Q92832 810 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 ATOH1Q92858 354 aaPredicted RBP15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 TNIP3Q96KP6 325 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 KRT82Q9NSB4 513 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 RAB20Q9NX57 234 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 ARHGAP26Q9UNA1 814 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 TICRRQ7Z2Z1 1910 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 DENND4CQ5VZ89 1909 aa15.5■□□□□ 0.07
PPP1CA-201ENST00000312989 MAN2B1O00754 1011 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 P4HA1P13674 534 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 SLC5A3P53794 718 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 UBE2HP62256 183 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 PLCB2Q00722 1185 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 CLEC20AQ6ZU45 233 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 GPRIN1Q7Z2K8 1008 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 YAF2Q8IY57 180 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 FBXL13Q8NEE6 735 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 TTC8Q8TAM2 541 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 TATDN2Q93075 761 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 SMARCD1Q96GM5 515 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 MSANTD3Q96H12 275 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 FAXDC2Q96IV6 333 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 ZFRQ96KR1 1074 aaKnown RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 NELL2Q99435 816 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 HNRNPABQ99729 332 aaKnown RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 GTPBP4Q9BZE4 634 aaKnown RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 IRF2BPLQ9H1B7 796 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 CHRDQ9H2X0 955 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 TRPC7Q9HCX4 862 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 DMAP1Q9NPF5 467 aaPredicted RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 PRMT8Q9NR22 394 aaPredicted RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 GKN1Q9NS71 199 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 FAM49BQ9NUQ9 324 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 BIN1O00499 593 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 DPYSL4O14531 572 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 PSMA7O14818 248 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 SP9P0CG40 484 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms