RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PFKMP08237 780 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CYP11B1P15538 503 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 YY1P25490 414 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 POU5F1Q01860 360 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RESTQ13127 1097 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NNTQ13423 1086 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ADCK5Q3MIX3 580 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF394Q53GI3 561 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GPR158Q5T848 1215 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CYP4F22Q6NT55 531 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 C11orf57Q6ZUT1 292 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 OTUD7AQ8TE49 926 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 E2F7Q96AV8 911 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SHDQ96IW2 340 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RPRD1AQ96P16 312 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NR1H4Q96RI1 486 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CLPBQ9H078 707 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RAD21L1Q9H4I0 556 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 VIPAS39Q9H9C1 493 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SCHIP1Q9P0W5 487 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TRHDEQ9UKU6 1024 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ASXL3Q9C0F0 2248 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SLC15A5A6NIM6 579 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RBAK-RBAKDNI3L0D1 243 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ENC1O14682 589 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 KCNN4O15554 427 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MFAP3LO75121 409 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DPEP1P16444 411 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NCF2P19878 526 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SULT1E1P49888 294 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 INPP5AQ14642 412 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DNAL1Q4LDG9 190 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CACHD1Q5VU97 1274 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GALNT18Q6P9A2 607 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SCARA5Q6ZMJ2 495 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SRLQ86TD4 932 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC6Q86X45 466 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RASEFQ8IZ41 740 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 IGDCC4Q8TDY8 1250 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MKL1Q969V6 931 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PABPC5Q96DU9 382 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SAMD11Q96NU1 681 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RBBP8Q99708 897 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PARVBQ9HBI1 364 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GPRC5DQ9NZD1 345 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 KLHL3Q9UH77 587 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 BARX2Q9UMQ3 279 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 USP18Q9UMW8 372 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DERAQ9Y315 318 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CDK5RAP2Q96SN8 1893 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TRPC5OSA6NMA1 111 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SGTAO43765 313 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TADA3O75528 432 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ZMYND10O75800 440 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MCF2P10911 925 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GPD1P21695 349 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CDC25CP30307 473 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ATP5C1P36542 298 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 IFNGR2P38484 337 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GPS1Q13098 491 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DPCR1Q3MIW9 517 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ANO5Q75V66 913 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ANKRD42Q8N9B4 389 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CLIC6Q96NY7 704 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 APBA2Q99767 749 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 FANCEQ9HB96 536 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SENP2Q9HC62 589 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ABCC13Q9NSE7 274 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 BTBD7Q9P203 1132 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DCDC2Q9UHG0 476 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SCOCQ9UIL1 159 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SLC45A1Q9Y2W3 748 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PCDHB5Q9Y5E4 795 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RBM47A0AV96 593 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CFAP73A6NFT4 308 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 VWA5AO00534 786 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MLNP12872 115 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NR1D1P20393 614 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CYP2A7P20853 494 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PRCPP42785 496 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GEMP55040 296 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DHX9Q08211 1270 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MMRN1Q13201 1228 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 KRR1Q13601 381 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NAB2Q15742 525 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PAGE2BQ5JRK9 111 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PPM1LQ5SGD2 360 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RGMBQ6NW40 437 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NEK5Q6P3R8 708 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CHSY1Q86X52 802 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NUDCD3Q8IVD9 361 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NCLNQ969V3 563 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 AHCYL2Q96HN2 611 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 POLE3Q9NRF9 147 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SPATS2LQ9NUQ6 558 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TRMT6Q9UJA5 497 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MOXD2PA6NHM9 499 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 C1QTNF3-AMACRE9PGA6 284 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PLEKHA8P1O95397 391 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms