RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CD101Q93033 1021 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 ZNF689Q96CS4 500 aaPredicted RBP23.72■■□□□ 1.39
IRF3-201ENST00000309877 PKMYT1Q99640 499 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 TSC2P49815 1807 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 FNDC1Q4ZHG4 1894 aaPredicted RBP23.71■■□□□ 1.39
IRF3-201ENST00000309877 BEST1O76090 585 aa23.71■■□□□ 1.39
IRF3-201ENST00000309877 FGFR3P22607 806 aa23.71■■□□□ 1.39
IRF3-201ENST00000309877 PSMA2P25787 234 aa23.71■■□□□ 1.39
IRF3-201ENST00000309877 CTNNA1P35221 906 aaKnown RBP23.71■■□□□ 1.39
IRF3-201ENST00000309877 RNASE9P60153 205 aaKnown RBP23.71■■□□□ 1.39
IRF3-201ENST00000309877 C4orf50Q6ZRC1 276 aa23.71■■□□□ 1.39
IRF3-201ENST00000309877 LRRTM3Q86VH5 581 aa23.71■■□□□ 1.39
IRF3-201ENST00000309877 PCDHA3Q9Y5H8 950 aa23.71■■□□□ 1.39
IRF3-201ENST00000309877 LTBP2Q14767 1821 aa23.71■■□□□ 1.39
IRF3-201ENST00000309877 PAPSS1O43252 624 aaPredicted RBP23.7■■□□□ 1.39
IRF3-201ENST00000309877 GABBR2O75899 941 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 GTF2F1P35269 517 aaKnown RBP eCLIP23.7■■□□□ 1.394e-10■■■■■ 32.8
IRF3-201ENST00000309877 SSR1P43307 286 aaKnown RBP23.7■■□□□ 1.39
IRF3-201ENST00000309877 OGDHQ02218 1023 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 BTG3Q14201 252 aaPredicted RBP23.7■■□□□ 1.39
IRF3-201ENST00000309877 CTXN3Q4LDR2 81 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 ZNF280DQ6N043 979 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 OLFML1Q6UWY5 402 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 SPATA2LQ8IUW3 424 aaPredicted RBP23.7■■□□□ 1.39
IRF3-201ENST00000309877 EMC1Q8N766 993 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 FNIP1Q8TF40 1166 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 KCTD13Q8WZ19 329 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 KRT35Q92764 455 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 MS4A14Q96JA4 679 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 SMOQ99835 787 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 LRRC4Q9HBW1 653 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 TMLHEQ9NVH6 421 aa23.7■■□□□ 1.39
IRF3-201ENST00000309877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.7■■□□□ 1.39
IRF3-201ENST00000309877 EFCAB8A8MWE9 144 aa23.7■■□□□ 1.38
IRF3-201ENST00000309877 PDE2AO00408 941 aaPredicted RBP23.7■■□□□ 1.38
IRF3-201ENST00000309877 BDNFP23560 247 aa23.7■■□□□ 1.38
IRF3-201ENST00000309877 ZNF365Q70YC5 407 aa23.7■■□□□ 1.38
IRF3-201ENST00000309877 C16orf59Q7L2K0 433 aa23.7■■□□□ 1.38
IRF3-201ENST00000309877 TMEM173Q86WV6 379 aaPredicted RBP23.7■■□□□ 1.38
IRF3-201ENST00000309877 CMTR2Q8IYT2 770 aaKnown RBP23.7■■□□□ 1.38
IRF3-201ENST00000309877 ZCWPW1Q9H0M4 648 aa23.7■■□□□ 1.38
IRF3-201ENST00000309877 CARD9Q9H257 536 aa23.7■■□□□ 1.38
IRF3-201ENST00000309877 PEX5P50542 639 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 RWDD2BP57060 319 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 ZNF252P-AS1Q0IIN9 211 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 SLC39A12Q504Y0 691 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 CC2D1AQ6P1N0 951 aaPredicted RBP23.69■■□□□ 1.38
IRF3-201ENST00000309877 SIX6OS1Q8N1H7 587 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 NIPA2Q8N8Q9 360 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 BCL7CQ8WUZ0 217 aaPredicted RBP23.69■■□□□ 1.38
IRF3-201ENST00000309877 ALG3Q92685 438 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 RPGRIP1Q96KN7 1286 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 B3GALT6Q96L58 329 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 YME1L1Q96TA2 773 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 TTPALQ9BTX7 342 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 RHOBTB2Q9BYZ6 727 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 UBXN6Q9BZV1 441 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 EHD2Q9NZN4 543 aa23.69■■□□□ 1.38
IRF3-201ENST00000309877 OR6C75A6NL08 312 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 F8VP50 259 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 H7C4K7 107 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 CTIFO43310 598 aaKnown RBP23.68■■□□□ 1.38
IRF3-201ENST00000309877 TADA3O75528 432 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 GRAP2O75791 330 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 OR4Q2P0C623 313 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 GPD1P21695 349 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 MARCKSL1P49006 195 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 ADIGQ0VDE8 80 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 MRPL58Q14197 206 aaKnown RBP23.68■■□□□ 1.38
IRF3-201ENST00000309877 KCNT2Q6UVM3 1135 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 RHOT1Q8IXI2 618 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 GOLGA1Q92805 767 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 PIWIL1Q96J94 861 aaKnown RBP23.68■■□□□ 1.38
IRF3-201ENST00000309877 ZNF558Q96NG5 402 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 KCNK16Q96T55 309 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 RC3H2Q9HBD1 1191 aaKnown RBP23.68■■□□□ 1.38
IRF3-201ENST00000309877 SMARCAL1Q9NZC9 954 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 TMEM59LQ9UK28 342 aa23.68■■□□□ 1.38
IRF3-201ENST00000309877 SCNN1AP37088 669 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 NFE2Q16621 373 aaPredicted RBP23.67■■□□□ 1.38
IRF3-201ENST00000309877 DAB2IPQ5VWQ8 1189 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 UBXN4Q92575 508 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 IGSF21Q96ID5 467 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 CSNK1G1Q9HCP0 422 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 DMAP1Q9NPF5 467 aaPredicted RBP23.67■■□□□ 1.38
IRF3-201ENST00000309877 CARNS1A5YM72 827 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 PSTPIP1O43586 416 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 PDGFRAP16234 1089 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 LAG3P18627 525 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 ZNF143P52747 638 aaPredicted RBP23.67■■□□□ 1.38
IRF3-201ENST00000309877 CACNA2D1P54289 1103 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 TAF5Q15542 800 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 DCAF12L1Q5VU92 463 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 ANKS3Q6ZW76 656 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 SLC26A9Q7LBE3 791 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 ZMIZ2Q8NF64 920 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 ACTRT1Q8TDG2 376 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 CLEC4CQ8WTT0 213 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 RXFP2Q8WXD0 754 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 HTATIP2Q9BUP3 242 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms