RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PRPF39Q86UA1 669 aaKnown RBP13.22□□□□□ -0.29
RETREG3-201ENST00000309428 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 RPF1Q9H9Y2 349 aaKnown RBP13.22□□□□□ -0.29
RETREG3-201ENST00000309428 ETAA1Q9NY74 926 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 GRHL1Q9NZI5 618 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.22□□□□□ -0.29
RETREG3-201ENST00000309428 SUPT3HO75486 399 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 DGKIO75912 1065 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 NPTXRO95502 500 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 DESP17661 470 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 MX2P20592 715 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 GPC3P51654 580 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 CDH6P55285 790 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 USP4Q13107 963 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 RAB6CQ53S08 254 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 ZCCHC23Q6ZST2 131 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 TAS1R3Q7RTX0 852 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 PIGWQ7Z7B1 504 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 OR6B3Q8NGW1 331 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 JOSD2Q8TAC2 188 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 CENPTQ96BT3 561 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 CLPTM1LQ96KA5 538 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 MRIQ9BWK5 157 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 RAB6CQ9H0N0 254 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 ASCC2Q9H1I8 757 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-201ENST00000309428 PCMTD2Q9NV79 361 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 SNX9Q9Y5X1 595 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 MCF2LO15068 1137 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 AVILO75366 819 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 PDE5AO76074 875 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 FOXN2P32314 431 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 ALCAMQ13740 583 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-201ENST00000309428 DUOXA2Q1HG44 320 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 MAP7D1Q3KQU3 841 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 KHDC1Q4VXA5 237 aaKnown RBP13.22□□□□□ -0.29
RETREG3-201ENST00000309428 DENND1BQ6P3S1 775 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 IYDQ6PHW0 289 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 ANKS1BQ7Z6G8 1248 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 TMEM35BQ8NCS4 154 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 MORC4Q8TE76 937 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 FAM81BQ96LP2 452 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 HAPLN2Q9GZV7 340 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 NMRK1Q9NWW6 199 aa13.22□□□□□ -0.29
RETREG3-201ENST00000309428 PSMC3IPQ9P2W1 217 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-201ENST00000309428 MROH7Q68CQ1 1323 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 A0A0A6YYK5 440 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 HCRTO43612 131 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 LAMTOR4Q0VGL1 99 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 MED21Q13503 144 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 MROH9Q5TGP6 573 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 DSTYKQ6XUX3 929 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 ZNF572Q7Z3I7 529 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 SLFN11Q7Z7L1 901 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 TEX9Q8N6V9 391 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 RNF148Q8N7C7 305 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 ANKRD36BP1Q96IX9 119 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 TSNARE1Q96NA8 513 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 SENP7Q9BQF6 1050 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 TRIM56Q9BRZ2 755 aaKnown RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 TMEM120AQ9BXJ8 343 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 HMGXB4Q9UGU5 601 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 MYO18AQ92614 2054 aaKnown RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 CITO14578 2027 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 IQANK1A0A1B0GTG1 560 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 NEMP1O14524 444 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 ARIH2O95376 493 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 PGM3O95394 542 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 TAC1P20366 129 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 PTPN4P29074 926 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 BPIFB4P59827 614 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 PTK7Q13308 1070 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 MPP2Q14168 576 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 HADHQ16836 314 aaKnown RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 GEN1Q17RS7 908 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 FAM160B1Q5W0V3 765 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 LRRC74BQ6ZQY2 392 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 DPP9Q86TI2 863 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 ATP11CQ8NB49 1132 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 ACTL9Q8TC94 416 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 TFAP2BQ92481 460 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 ZNF75CPQ92670 426 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 UVRAGQ9P2Y5 699 aa13.21□□□□□ -0.29
RETREG3-201ENST00000309428 CORO1CQ9ULV4 474 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-201ENST00000309428 APRTP07741 180 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 NFICP08651 508 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 CAV1Q03135 178 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 MAMLD1Q13495 774 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 IL31Q6EBC2 164 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 FEZF2Q8TBJ5 459 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 SEPT1Q8WYJ6 367 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 CDHR1Q96JP9 859 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 ADPGKQ9BRR6 497 aa13.21□□□□□ -0.3
RETREG3-201ENST00000309428 CLIC5Q9NZA1 410 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms